Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1849 ATGCTGTTGAGTTCATTTTGTGTCACATGGCCATATTTGTGGTGTTGGGACTCCACCAGCTTGCATCCAATTCTAACCATTCTAGTCACACTGATCAGTGTGCTATGTTTGCTAAGGTGGTTCAAGAATTCAAGCTATGAAGCCACTCTTCCATCTCCTTTGCCTCCAGGTCCACTAGGCCTGCCACTCCTTGGGTACCTTCCCTTCCTAGGAACCAATCCCCACCTCAAATTTCACAAGCTTGCACAAGTTTATGGTCCTATCTACAAGCTCATGTTGGGAACCAAAACATTCATTGTGGTTAGCTCACCCTCTTTGGTGAAAGAGATAGTGCGTGACCAAGACACCGTATTCGCCAACCGTGACCCTCCCATTTCTGTATTGGTGGCCTTGTATGGTGGCACTGACATAGCCTCTTTGCCTCTTGGTCCGCGGTGGAGGAAGGCACGCAAGATATTTGTGAGTGAGATGCTCAGCAACACCAACATCAGTAGCTCTTTTTCTCATAGAAAGATAGAGGTTAAGAAATCTATTAGAGATGTTTATGAGAAGAAAATAGGGTGCCCTATAAGTATTAGTGAGTTGGCTTTTCTAACTGCTACAAATGCAATAATGAGTATGATTTGGGGTGAGACTTTGCAAGGGGAAGAAGGGGCTGCTATTGGGGCTAAGTTTAGAGCATTTGTGTCAGAACTTATGGTGTTAGTAGGGAAGCCGAATGTTTCGGATCTTTACCCCGCACTAGCCTGGTTAGATTTGCAAGGAATTGAGACAAGAACAAGAAAGGTCTCCCAATGGATTGATAAGTTCTTTGATTCTGCCATTGAAAAGCGAATGAATGGGACAGGAGAGGGAGAAAATAAGTCAAAGAAGAAAGATTTACTGCAATATCTGTTGGAGCTTACAAAGAGTGATAGTGATTCAGCATCAATGACCATGAACGAGATCAAGGCCATCCTCATAGATATAGTGGTGGGTGGAACCGAGACCACATCAACAACATTAGAATGGGTGGTAGCAAGGCTGTTGCAGCATCCTGAGGCAATGAAGAGAGTTCATGAAGAGTTGGATGAGGCAATAGGATTGGATAATTGTATTGAATTAGAATCCCAATTGTCCAAATTACAGCACTTAGAAGCTGTCATAAAGGAAACACTTCGTTTGCATCCCCCTCTCCCCTTCTTGATACCCCGTTGCCCGAGTCAAACTAGCACTGTTGGTGGATACACCATTCCAAAGGGTGCACAAGTAATGTTGAACGTGTGGACTATACACAGGGACCCTGACATTTGGGAAGATGCATTGGAATTTCGACCGCAGAGGTTTCTGAGTGATGCTGGCAAGTTGGACTACTGGGGGGGCAACAAATTTGAGTATCTTCCTTTTGGATCCGGAAGAAGAATCTGTGCAGGGCTACCTCTTGCTGAGAAGATGATGATGTTTATGCTTGCTTCCTTCTTGCATTCTTTTGAGTGGAGATTGCCTAGTGGCACAGAGCTTGAATTTTCAGGCAAATTTGGTGTTGTTGTCAAGAAAATGAAACCATTAGTTGTTATTCCGAAGCCTAGACTATCTAAACCAGAACTCTATCAATGA 1596 0.4398 MLLSSFCVTWPYLWCWDSTSLHPILTILVTLISVLCLLRWFKNSSYEATLPSPLPPGPLGLPLLGYLPFLGTNPHLKFHKLAQVYGPIYKLMLGTKTFIVVSSPSLVKEIVRDQDTVFANRDPPISVLVALYGGTDIASLPLGPRWRKARKIFVSEMLSNTNISSSFSHRKIEVKKSIRDVYEKKIGCPISISELAFLTATNAIMSMIWGETLQGEEGAAIGAKFRAFVSELMVLVGKPNVSDLYPALAWLDLQGIETRTRKVSQWIDKFFDSAIEKRMNGTGEGENKSKKKDLLQYLLELTKSDSDSASMTMNEIKAILIDIVVGGTETTSTTLEWVVARLLQHPEAMKRVHEELDEAIGLDNCIELESQLSKLQHLEAVIKETLRLHPPLPFLIPRCPSQTSTVGGYTIPKGAQVMLNVWTIHRDPDIWEDALEFRPQRFLSDAGKLDYWGGNKFEYLPFGSGRRICAGLPLAEKMMMFMLASFLHSFEWRLPSGTELEFSGKFGVVVKKMKPLVVIPKPRLSKPELYQ* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1849 531 SUPERFAMILY Cytochrome P450 55 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 Gene3D Cytochrome P450 47 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 Pfam Cytochrome P450 55 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PANTHER OS08G0547900 PROTEIN 7 531 - -
Gso7g1849 531 PANTHER P450, PUTATIVE-RELATED 7 531 - -
Gso7g1849 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Gso7g1849 531 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso7g1849 531 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1849 Gso-Chr7 41277595 41280170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1849 13 530 Cytochrome P450 AT4G12320 44.933 2.24e-161 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1849 - - gmx:100785686 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1849 7 41277595 41280170 Gso5g0180 5 1915630 1918064 PCT
Gso7g1849 7 41277595 41280170 Gso17g0656 17 6084718 6087659 PCT