Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1842 ATGCAAAATGTGCTGCGACAAGGAGAGTTTGAAGAAACTGAAATCCAGCGTTCCGTCGAGGAAGACGAAGGTTCGGAGAAACGGAGAGGAACGGAGGTGAAGAAGACGACGGTGACGAGGAGAAGTGTGGAGGGGAAGGTGAAGGAGAGCTTCGCGGTGGTGAAGAAGTCGAAGGATCCTTATGAAGACTTGAGGAAATCGATGATAACGGAGATGGAGATGTCTGAGGCCGAAGATTTGGAGCAGCTTTTGCAGTGTTTCTTGGCTTTGAACTCGCGGAGTTATCATGCAGTTATTGTGCGGGCTTTCATGGAGATTTGGCAACAAATGTTCGTAATGAAAAATCTCCAAACGAACGTTAAAACTCAGGAAAAGTAA 378 0.4683 MQNVLRQGEFEETEIQRSVEEDEGSEKRRGTEVKKTTVTRRSVEGKVKESFAVVKKSKDPYEDLRKSMITEMEMSEAEDLEQLLQCFLALNSRSYHAVIVRAFMEIWQQMFVMKNLQTNVKTQEK* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1842 125 ProSiteProfiles OVATE domain profile. 53 109 IPR006458 -
Gso7g1842 125 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 32 114 IPR038933 GO:0045892
Gso7g1842 125 PANTHER TRANSCRIPTION REPRESSOR OFP7 32 114 - -
Gso7g1842 125 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 51 110 IPR006458 -
Gso7g1842 125 MobiDBLite consensus disorder prediction 10 39 - -
Gso7g1842 125 Pfam Transcriptional repressor, ovate 57 111 IPR006458 -
Gso7g1842 125 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1842 Gso-Chr7 41142278 41142655 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso7g1842 Ovate 1.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1842 - - gmx:106799316 244.588