LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso7g1828	ATGGCAAGAAAAACCAAGTCCATTTTCTTAGCCTTCTTACTACTATGCTCTTTCTCACTGGGGGTAGTGGTAGTAGCCCAAGAGGAGGCAATAGCAAAATCCGAAAGTGAAGCATTAGGGGAACCAGAGAAAAGAGAAACACTTGAAATCATCATTGGTGGAGGTGGTTCACCTGCTCCTTCTCCCTCTCCCCCTACATATTGCCCACCTCCTCCACCAAAACCACTGAGCCGGTTGGAGAAAGCAAAACGTGTTCTTCTCAAATTCAAAACCACAATCGACGACCCCAATTGTTACACGCAAAACTGGAGCCAGGACACAGACGCGTGTAAATTCAATGGGGTACGATGCGCCAATTTCCCAGACGATCAGCAGCGAGCAGTAGCTGGACTTGACCTAAACGGAGCAAAACTCGCCACTAAAAACGGTGGCAATTTGCCCCTCACGGGTCTCCTCGACAGCATACCCGAGTTAACATTCTTCCACGTTAACTCCAACAACTTCTCCTTCGTCGGTGGCTTCCCCAACAACATTACCAGGTTCCGTTTCTTCTTCGAGCTTGATCTCAGTAACAACAAAGTCAGTGGCAAGTTCCCAACGCAAGCAATTCAGAACAACCAGTTAGTCTTCCTGGACCTCAGGTTCAACCAGCTCACCGGGCCCATTGACCCGAAACTCTTCGAGAGGGACCTGGACGTGATTTTTGTGAACAACAACAAGTTCACGGGGTACCTCCCGGAGAATTTCGGGTCCACGCCGGCCCGGTACCTCACGTTTGCCCACAACAGCCTCTCGGGCTCGCTCCCTAAGAGCGTGGGCTACGCGCCGAACCTCACCGAGGTTCTCTTCTTGAAGAACCAGTTCGAAGGGTGTCTGCCCTTCGAAATCGGTTACCTCAAGAAGGCCGTAGTGTTTGATATAAGTGAAAATCTCTTGACCGGTCCCATCCCGCTCTCCTTCGGATGCCTGAAGAAAATTCAATTTCTCAATTTGGCGCACAACAAGCTCTACGGCTGTGTTCCCGACAACCTTTGCCAAATTCCTTCTATCCGCAACAATGGGAATCTCTCTTTGGCGAACAATTATTTCAACGAAATTGGACCTTCGTGTTGGAGTTTGATAAAGTCCAAGGTTTTGGATGTGTCAGGAAACTGCATTCCGGGGCTTCCTAACCAAAAGTCTCCCAAAGAATGCTACCAGTTTTACAAAACAAAGAAAACATGTCCGAACCCGAATTCATTTTACTACGTTCCGTGCAAATCGTACTGGGGGAGGCAGAGCAAGCCCACTAGTCCACCTTCTGAGCCAGTGACTTACAAGACTCTCAAACCACATCGTCTCAGATTGTGA	1350	0.4896	MARKTKSIFLAFLLLCSFSLGVVVVAQEEAIAKSESEALGEPEKRETLEIIIGGGGSPAPSPSPPTYCPPPPPKPLSRLEKAKRVLLKFKTTIDDPNCYTQNWSQDTDACKFNGVRCANFPDDQQRAVAGLDLNGAKLATKNGGNLPLTGLLDSIPELTFFHVNSNNFSFVGGFPNNITRFRFFFELDLSNNKVSGKFPTQAIQNNQLVFLDLRFNQLTGPIDPKLFERDLDVIFVNNNKFTGYLPENFGSTPARYLTFAHNSLSGSLPKSVGYAPNLTEVLFLKNQFEGCLPFEIGYLKKAVVFDISENLLTGPIPLSFGCLKKIQFLNLAHNKLYGCVPDNLCQIPSIRNNGNLSLANNYFNEIGPSCWSLIKSKVLDVSGNCIPGLPNQKSPKECYQFYKTKKTCPNPNSFYYVPCKSYWGRQSKPTSPPSEPVTYKTLKPHRLRL*	450

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso7g1828	449	Pfam	Leucine rich repeat N-terminal domain	82	117	IPR013210	-
	Gso7g1828	449	Gene3D	Ribonuclease Inhibitor	79	253	IPR032675	-
	Gso7g1828	449	Gene3D	Ribonuclease Inhibitor	254	414	IPR032675	-
	Gso7g1828	449	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	12	436	-	-
	Gso7g1828	449	PANTHER	BNAC05G26270D PROTEIN	12	436	-	-
	Gso7g1828	449	SUPERFAMILY	L domain-like	82	386	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso7g1828	Gso-Chr7	40967365	40969384	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso7g1828	78	401	Leucine-rich Repeat extension Gene Families	AT4G13340	42.508	5.29e-73	242

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso7g1828	-		-	gmx:100781948	871.692