Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1827 ATGGTTTTATTTAAGCAATTAGCATCACTTTCAACACTCCTCACCCTATTCTTTCTTCACCTTCTCTTAGTAGATTCCCAAATCCTTGAAACTCCATCACCACCACCCGATCCAACCTCACTGGTCCCCAACATTTTAAACTTCATAGACCAGAGGCTCGCACAGGTCTTCCCAATCATCCAAACCTTCAAGAACACAATAACCTCAGACCCTCGTGGAGTAACATCAACATGGGTTGGTCCAAACATATGCAACTACACAGGCTTCTATTGCGACAACCCACCGGACAACCTCACTGCCACAACCATCGCCTCGATCGACTTCAACGGCTTTCAGCTCACCGCTCCAACCCTAGATGGCTTCATCGACCAACTCCCTGACCTGGCTCTCTTCCATGCAAACTCCAACAAATTTTCCGGCATCGTTTCGCCAAAAATTGCAGGACTCAAGTTCCTCTACGAGCTCGATTTGAGCAACAACTTGTTCTCTGGGGCGTTCCCCACATCGGTCCTCAACATCCCAACCTTATCCTTCTTGGACATTAGGTTCAACTCCTTCAGCGGCACATTGCCCCCACAAATTTTCATGCAAACCTTAGACGTTCTTTTCCTCAACGACAACAATTTCATGCTGACACTTCCCAACAACCTAGGCAACGCCCCAGTTGTTTATCTAACATTAGCCAACAACAAATTCACCGGCCCCATTCCACGTAGCATTGGCAAAGCCTCGTCCACGTTGATCGAAGTGTTACTATTGAACAACCTTTTAACAGGTTGTCTTCCTTATGAAATTGGTTTCTTGAAAAATCTCACATTGTTTGATGTTGGTGGGAACCTCTTAACTGGTCCAATTCCATGGTCATTTGGGTGCTTGAAGAAAGTGGAGCAGCTTAACCTAGCTAGGAACTTCTTGTACGGACAGGTTCCGGAAGTGGTGTGTGCGTTGGGGAATTTGGCGAACTTTTCGTTGTCTTATAATTATTTTACTAAAGTGGGACCATTGTGTATGATGCTGATTCAAAGGGGTGTTCTTGATGTGAGGAAGAACTGCATTTTCGGGCTTCCGGATCAGAGATCGGTGAGGGAGTGCATGGCATTCTTTTTGATTCCTAGGTCTTGTTCGCACCCTGCGTTGTTTAACTTCGTACCGTGTCAGATTCAACATCATTGGACCAAACCGCAAGAGAGAACTAAGTCTAAGAGGCATTTGCTGTCATATTCTGCTCTTTCCAGAAATAGAGTAGTTTTGTAA 1254 0.4537 MVLFKQLASLSTLLTLFFLHLLLVDSQILETPSPPPDPTSLVPNILNFIDQRLAQVFPIIQTFKNTITSDPRGVTSTWVGPNICNYTGFYCDNPPDNLTATTIASIDFNGFQLTAPTLDGFIDQLPDLALFHANSNKFSGIVSPKIAGLKFLYELDLSNNLFSGAFPTSVLNIPTLSFLDIRFNSFSGTLPPQIFMQTLDVLFLNDNNFMLTLPNNLGNAPVVYLTLANNKFTGPIPRSIGKASSTLIEVLLLNNLLTGCLPYEIGFLKNLTLFDVGGNLLTGPIPWSFGCLKKVEQLNLARNFLYGQVPEVVCALGNLANFSLSYNYFTKVGPLCMMLIQRGVLDVRKNCIFGLPDQRSVRECMAFFLIPRSCSHPALFNFVPCQIQHHWTKPQERTKSKRHLLSYSALSRNRVVL* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1827 417 SUPERFAMILY L domain-like 62 354 - -
Gso7g1827 417 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 8 414 - -
Gso7g1827 417 Gene3D Ribonuclease Inhibitor 222 367 IPR032675 -
Gso7g1827 417 Gene3D Ribonuclease Inhibitor 59 220 IPR032675 -
Gso7g1827 417 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 8 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1827 Gso-Chr7 40953425 40955100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1827 48 371 Leucine-rich Repeat extension Gene Families AT3G24480 47.531 3.33e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1827 - - gmx:100813314 800.816