Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1819 ATGTCGCAGCCGCAGCCTCAGTCGCAGCCGCAACACGGGCAAGCGGCGCTGGAGCAGGTGCAGTGCTTCGGTCGCAAGAAGACGGCGGTGGCCGTGACCTACTGCAAGCGCGGGCGCGGCCTCATCAAGATCAACGGCTGCCCCATCGAGCTCGTCGAGCCGGAGATCCTCCGCTTTAAGGCCTTCGAGCCCATCCTCCTGTTGGGAAAGAGCCGCTTCGCCGGCGTCGACATGCGCATCCGCGTCAAGGGCGGCGGCCACACCTCCCAGATCTACGCCATTCGCCAGAGCATCGCCAAGGCGCTCGTCGCGTTCTACCAGAAGTACGTTGATGAACAGAGTAAGAAGGAGATCAAGGACATTCTGGTGAGGTACGATCGTACCTTGCTCGTCGCGGATCCCAGGCGCTGCGAGCCCAAGAAGTTTGGTGGGCGTGGCGCACGTGCGAGGTTCCAGAAGTCTTACCGTTGA 471 0.6242 MSQPQPQSQPQHGQAALEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1819 156 ProSitePatterns Ribosomal protein S9 signature. 84 102 IPR020574 GO:0003735|GO:0005840|GO:0006412
Gso7g1819 156 Pfam Ribosomal protein S9/S16 24 156 IPR000754 GO:0003735|GO:0005840|GO:0006412
Gso7g1819 156 PANTHER - 1 156 - -
Gso7g1819 156 Gene3D - 11 156 IPR014721 -
Gso7g1819 156 PANTHER RIBOSOMAL PROTEIN S9 1 156 IPR000754 GO:0003735|GO:0005840|GO:0006412
Gso7g1819 156 SUPERFAMILY Ribosomal protein S5 domain 2-like 19 156 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1819 Gso-Chr7 40849300 40850158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1819 14 156 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.811 6.99e-93 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1819 K02960 - gmx:100779794 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1819 7 40849300 40850158 Gso2g0865 2 9842271 9843050 GST