Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1812 ATGTTTTTCTGGCTTGAATCTTTGGTGGGATTGTTGGCTTTTCTTGGAATGCAGCTTCCTGTCATAATGGCTGATTGCCCTTTGGATTTTACTGGTTCGAACTTCACACTGGCATCCTCTCTATGCTCCAACCATGGTGACAGGGGAAAATGTTGCCGCTACATCAATACTAATGTTGCAATTTCTGTTGCTCGTTTTGCTAATGCAACAGGCAACCTAGGGGTCCCTCAAAATGCGTCTGACACGTGCCTCCAAACCATATTTCAAACCTTGCAACTTAATGGAGTTGCACAAAATGCAACAGCTTTCTGTGGTTTTGGGACAAAAATTCCTGTTAATTATGAATGCAGGGGGAGAACTAGTGTTGCCCAAATGCTGCAATCCCCCAGATTTACGGAGGTCACAAAAAATTGCAAAGCACCACTTGGAGAGGAAAGTAAATGTAAGAAATGCTTAAATGCCGGCTTTGGTTATCTGCATCATATTGGAATTGAAGATAATATATCACTAAGTACATGCCGTGATGCCACTTTTGCTGCACTAGCAAGCCAGGTTGATGAGATATCTATTATTGACATTGCAATTTGTTTCTTTGGGGTTCAAGGACTTCTCATACCTCCTGTTTCAGAGTCATCCCCATCCTTTCCTGCTCCTAAGGCTTCACCAAGCCCCCCACTGGTTGCTGATGGGCCAAGTCAACCATTGTTAAGTGCACCTTTAAAGGGAAACCACCATTCATATCATTTGACATTAGTTCCAGGTATTGCTATTGCAGTTACAGCTGTTGCTGTTATCACACTCATAGTCTTGATAGTTCTAATTCGCCAGAAAAGCAGAGAGCTAGACGAGCCCGATAATTTTGGTAAATCCTGTTCGAAAACATTACCTCCTTGTGCAACGTGGAAATTTCAGGAAGGTTCTTCATCTATGTTCCGAAAATTCAGCTACAGGGAGATAAAAAAGGCAACAGAGGACTTTAGCACTGTCATTGGCCAAGGGGGATTTGGAACTGTGTATAAAGCTCAATTTTCTGATGGCCTGGTCATAGCAGTAAAAAGGATGAACAGAATATCTGAGCAGGGAGAGGATGAGTTCTGCAGAGAAATTGAACTTCTTGCTCGACTGCACCATCGGCATCTTGTTGCTTTAAAAGGCTTTTGCATTAAAAAACGTGAGAGGTTTCTGTTGTATGAGTACATGGGAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGTAAAACACCTTTAAGTTGGCGAACTAGAATCCAAATTGCCATTGATGTCGCCAATGCACTGGAGTACCTCCATTTCTATTGCGATCCTCCTCTGTGTCACAGAGATATTAAATCTAGCAACACTTTACTGGATGAGAACTTTGTCGCTAAGATAGCCGATTTTGGCCTTGCACAAGCTTCAAAAGATGGCTCAGTATGCTTTGAACCTGTAAACACTGAAATCCGGGGAACTCCAGGTTATATGGATCCTGAATATGTTGTTACTCAAGAGCTCACCGAGAAAAGTGATATATACAGTTTTGGGGTGTTACTACTTGAAATTGTGACAGGAAGGCGAGCCATTCAAGGTAATAAGAATTTGGTAGAATGGGCTCAACCATACATGGAATCAGACACAAGATTACTGGAGCTAGTAGATCCCAATGTGAGGGAGTCTTTTGACTTGGATCAGCTCCAAACAGTAATCTCTATAGTAGCATGGTGCACACAGAGAGAAGGAAGGGCAAGGCCTTCGATAAAACAGGTACTTAGGCTTCTGTATGAGACATCAGAACCAATGCACAGTGAGTTTCTACAAGCAGTTGAAGATGAAGAATGTCAGGGAAGTCAGCACAGAGGCAGAAGAAGCAAGGGGAAAATGCTCAGAAATGAGGCATTGTCTCACAGCGGAGATGGAAGATATCTTGCTTCATCTTCAAGTACGTCTAGGTCGTATTGCAGTAGAACCTTTTTACTTGAGAGTGGCTCTCCACAGTCTCCGCCAAATATTTTCTCTCTCTGA 2019 0.4264 MFFWLESLVGLLAFLGMQLPVIMADCPLDFTGSNFTLASSLCSNHGDRGKCCRYINTNVAISVARFANATGNLGVPQNASDTCLQTIFQTLQLNGVAQNATAFCGFGTKIPVNYECRGRTSVAQMLQSPRFTEVTKNCKAPLGEESKCKKCLNAGFGYLHHIGIEDNISLSTCRDATFAALASQVDEISIIDIAICFFGVQGLLIPPVSESSPSFPAPKASPSPPLVADGPSQPLLSAPLKGNHHSYHLTLVPGIAIAVTAVAVITLIVLIVLIRQKSRELDEPDNFGKSCSKTLPPCATWKFQEGSSSMFRKFSYREIKKATEDFSTVIGQGGFGTVYKAQFSDGLVIAVKRMNRISEQGEDEFCREIELLARLHHRHLVALKGFCIKKRERFLLYEYMGNGSLKDHLHSPGKTPLSWRTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNTLLDENFVAKIADFGLAQASKDGSVCFEPVNTEIRGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRAIQGNKNLVEWAQPYMESDTRLLELVDPNVRESFDLDQLQTVISIVAWCTQREGRARPSIKQVLRLLYETSEPMHSEFLQAVEDEECQGSQHRGRRSKGKMLRNEALSHSGDGRYLASSSSTSRSYCSRTFLLESGSPQSPPNIFSL* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1812 672 Gene3D Phosphorylase Kinase; domain 1 298 399 - -
Gso7g1812 672 SUPERFAMILY Protein kinase-like (PK-like) 306 595 IPR011009 -
Gso7g1812 672 Pfam SPARK 25 162 IPR043891 -
Gso7g1812 672 PANTHER OS01G0750732 PROTEIN 7 672 - -
Gso7g1812 672 PANTHER BNAC06G02630D PROTEIN 7 672 - -
Gso7g1812 672 SMART serkin_6 324 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1812 672 CDD STKc_IRAK 330 592 - -
Gso7g1812 672 ProSiteProfiles Protein kinase domain profile. 324 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1812 672 Gene3D Transferase(Phosphotransferase) domain 1 400 617 - -
Gso7g1812 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Gso7g1812 672 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Gso7g1812 672 Pfam Protein kinase domain 328 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1812 Gso-Chr7 40734694 40741048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1812 24 672 Receptor kinase-like Gene Family AT3G19300 60.337 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Gso7g1812 Pkinase 7.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1812 - - gmx:100807955 1309.28