Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1805 ATGAACTTCAGGAACTTTGGTGATAATAATAGTAACCACCCCACTTGGGATGCCATGCATGGGAAGACACCAGCAAACAATGTTACTACTCTGCTGAGACAGCCCTCAACAATATACTCATTGACATTTGATGAGTTTCAGAGCACAATGGGTGGGATTGGGAAGGATTTTGGGTCGATGAACATGGATGAACTCTTGAAGAACATATGGGCAGCTGAAGAGACTCAAGCCATGGCATTTTCAGCTGGTGCAGCAGGAGGAGAAGGCCATAACAACAACCCTATTAGTGGTGGTTTGCAAAGACAAGGTTCTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTTGATGAGGTTTGGAGGGACTTGATCAAAGATAGTAGTGGTGGGGCCAAGGATGGTGGAAGTGGCAATGGTGGCTCATCAATTCCTCAAAGGCAAGCAACATTGGGAGAAATGACATTGGAGGAGTTTTTGGCGAGAGCTGGGGTTGTGAGAGAAGATGTGCCTCAACAACAACAACAACAACAAATTGGAAAACCAAACAACAATGGATGGTTTGGTGACTTTCCTAGACCAGACAATAACAACACTGGCCTACTTTTTGGGTTTCAACAACCAAATAGAAGCAACGGGAATTTGGGTGAGAACACTAACTTAGTTCCCAAACAACCTCCTCCTCCTTTATCATTAAACTCAAACCACTCCCAAAGACAAGCACAACAGCACCAACAACAGCCACCACCACTTTTTCCAAAGCCAGCAAATGTAACTTTTGCAGCTGCTCCTATGCATTTGTTGAACAATGCACAACTTGCTAGCCCTGGCAGAAGGAGAGGGTTGATTGGAGTTGCTGAGCATTCGATGAATGTTGGAATGGTTGGTTTAGCCACAGCTAATGTCACAGCTTCTGCCTCAAGTAAAATATCACCTGATGTTATTACAAGGAGTAATAATGTTGATAACTCTCCAATATCACCGCATTATGTAATCAACAGGGGAAGGAAATTCAGTGCCATAGAGAAAGTGGTTGAGAGGAGACAAAGGAGAATGATAAAAAATAGAGAATCAGCTGCGAGGTCAAGGGCTCGTAAGCAGGCCTACACTTTCGAACTAGAAGCTGAGGTTGCAAAACTTAAGGAATTAAACAGAGAATTACAAAGAAAACAGGAAGAAATCATGGAAATGCAGAAAAATAAGGATTTGGACCCTGCATGCAGACCAAGGGTAAGTAAAATACACTGCTTGAGAAGGACACTTACTGGACCATGGTAG 1275 0.4322 MNFRNFGDNNSNHPTWDAMHGKTPANNVTTLLRQPSTIYSLTFDEFQSTMGGIGKDFGSMNMDELLKNIWAAEETQAMAFSAGAAGGEGHNNNPISGGLQRQGSLTLPRTLSQKTVDEVWRDLIKDSSGGAKDGGSGNGGSSIPQRQATLGEMTLEEFLARAGVVREDVPQQQQQQQIGKPNNNGWFGDFPRPDNNNTGLLFGFQQPNRSNGNLGENTNLVPKQPPPPLSLNSNHSQRQAQQHQQQPPPLFPKPANVTFAAAPMHLLNNAQLASPGRRRGLIGVAEHSMNVGMVGLATANVTASASSKISPDVITRSNNVDNSPISPHYVINRGRKFSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKELNRELQRKQEEIMEMQKNKDLDPACRPRVSKIHCLRRTLTGPW* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1805 424 MobiDBLite consensus disorder prediction 93 112 - -
Gso7g1805 424 SMART brlzneu 342 406 IPR004827 GO:0003700|GO:0006355
Gso7g1805 424 Coils Coil 365 399 - -
Gso7g1805 424 Pfam bZIP transcription factor 346 398 IPR004827 GO:0003700|GO:0006355
Gso7g1805 424 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 424 IPR043452 GO:0003700|GO:0045893
Gso7g1805 424 MobiDBLite consensus disorder prediction 1 20 - -
Gso7g1805 424 Gene3D - 344 401 - -
Gso7g1805 424 MobiDBLite consensus disorder prediction 88 112 - -
Gso7g1805 424 MobiDBLite consensus disorder prediction 230 246 - -
Gso7g1805 424 SUPERFAMILY Leucine zipper domain 346 394 IPR046347 GO:0003700|GO:0006355
Gso7g1805 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 349 364 IPR004827 GO:0003700|GO:0006355
Gso7g1805 424 MobiDBLite consensus disorder prediction 125 145 - -
Gso7g1805 424 MobiDBLite consensus disorder prediction 167 255 - -
Gso7g1805 424 MobiDBLite consensus disorder prediction 168 183 - -
Gso7g1805 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 344 395 IPR004827 GO:0003700|GO:0006355
Gso7g1805 424 CDD bZIP_plant_BZIP46 346 400 - -
Gso7g1805 424 MobiDBLite consensus disorder prediction 198 220 - -
Gso7g1805 424 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 26 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1805 Gso-Chr7 40673202 40677076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1805 13 424 bZIP Transcription Factor Family AT1G49720 47.887 4.46e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso7g1805 bZIP_1 9.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1805 K14432 - gmx:100776600 780.015