Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1798 ATGAAGAACGAATTTGCTCGCATGGACGATAAGGTTCACTGCCTAAGCCAGAGCAACCAGACCTTCACCTGTAGGTGTGACTTCAAACTCCTCACTGCAATGCCGTCGTCACCATCACCACACCAAACAAACTCTTTGTCTCCAACTGCAACAACTCCCGCATCGTACTCTACCACAATGGCACCACCATGTCTCTCTCCTCCGATCACAAGAACGGTGTGCACAGCTGGACCTTACCTGCCACGTCACCCCCAAACCGTATATAAACACTCTCCAGTTCGAAAATTAAACTTCAACGCGCCAAACACAAAGCAAACACCTCCAACTACAAACAAACACACTTCACAACTTTGCTTTTTCTCTCTTTCAATGTCCTCTTCTTCCTTCTCCCCCGCCACTCTCACCACCGAGCAGGAGCTTTCCGTCATCGTTGCCGCCCTTACCAACGTCGTCGCCGGCTCCACCTCCGCCTCCAGCTCCTTCTCCCTCCCCGAATTCCGCCTTCCACAGACCTCTGATCCTCTCGCCGCCGCCTGCCTAATGCCGCCGCCGCCGCCGCCGAGCATGGACACTTGTCGCGAGTGCAACATCGCAGGATGCCTGGGATGCAACTTTTTCCCGGAGGAGAAAAAGAAGCAGAAGAGGGCCAAGAAGAAGTACAGAGGCGTGAGGCAGAGGCCCTGGGGAAAGTGGGCCGCGGAGATTCGCGACCCTCGTCGTGCTGCCCGGGTCTGGCTCGGCACGTTCGGAACCGCCGAGGATGCCGCCCGGGCCTACGACAAGGCCGCGATTGAGTTCCGCGGCCCACGGGCCAAGCTCAATTTCCCCTTGGTGGACGAGTCGCTCACTTTGCAGCAGAGCGAGCCAGAGAGGGTTCAAACAGAAGAAGAGCAAATAAAGACAGAGAATCTCAATCAAGGTATGGAAATGGATTCATTCGGGAACAAGGATACCGAATTCTGGGACAGGATTAACGAAGCTGATTTTCATCAGCTCATGATGATGATGGATTTTGCTGGAGATTCTTCCGACTCTGCCACTGGGAACGCTCTTAGTTCTTGA 1062 0.5433 MKNEFARMDDKVHCLSQSNQTFTCRCDFKLLTAMPSSPSPHQTNSLSPTATTPASYSTTMAPPCLSPPITRTVCTAGPYLPRHPQTVYKHSPVRKLNFNAPNTKQTPPTTNKHTSQLCFFSLSMSSSSFSPATLTTEQELSVIVAALTNVVAGSTSASSSFSLPEFRLPQTSDPLAAACLMPPPPPPSMDTCRECNIAGCLGCNFFPEEKKKQKRAKKKYRGVRQRPWGKWAAEIRDPRRAARVWLGTFGTAEDAARAYDKAAIEFRGPRAKLNFPLVDESLTLQQSEPERVQTEEEQIKTENLNQGMEMDSFGNKDTEFWDRINEADFHQLMMMMDFAGDSSDSATGNALSS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1798 353 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 127 348 - -
Gso7g1798 353 SUPERFAMILY DNA-binding domain 219 277 IPR016177 GO:0003677
Gso7g1798 353 CDD AP2 220 276 IPR001471 GO:0003700|GO:0006355
Gso7g1798 353 PRINTS Ethylene responsive element binding protein signature 220 231 IPR001471 GO:0003700|GO:0006355
Gso7g1798 353 PRINTS Ethylene responsive element binding protein signature 242 258 IPR001471 GO:0003700|GO:0006355
Gso7g1798 353 ProSiteProfiles AP2/ERF domain profile. 219 276 IPR001471 GO:0003700|GO:0006355
Gso7g1798 353 SMART rav1_2 219 282 IPR001471 GO:0003700|GO:0006355
Gso7g1798 353 Gene3D AP2/ERF domain 218 278 IPR036955 GO:0003700|GO:0006355
Gso7g1798 353 Pfam AP2 domain 219 268 IPR001471 GO:0003700|GO:0006355
Gso7g1798 353 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 127 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1798 Gso-Chr7 40531967 40534745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1798 129 279 AP2-EREBP Transcription Factor Family AT4G34410 48.148 7.74e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gso7g1798 AP2 7.2e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1798 - - gsj:114420690 626.706