Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1780 ATGGGGGTTTGCACTTCGAAGCCGCAGAAGCCGAGCCCTTACGCGCTTCGCGAAGCCGAAGCCGAAGCCGACCCTTCGCAAATCCCGAAAACCCCACTCAGCCCCGCCGCCGCCGACACCCCTCGCCGGAAAGATGACGCCATCACCGGAAAACGGTCGCCGTTCTACCCGTTCTACAGCCCGAGCCCGGCTCGCTTCCTGAAGAAGTCTCCGGCACCGGCGGGAGGGAGCCGGAGCGCGAGCTCCACGCCGAGGAGGTTTTTCCGGCGGCCGTTCCCACCTCCGTCGCCGGCGAAGCACATAAGGGCGGTGCTGGCTCGGCGGCAGGGCAAGAAGGCGTCGGCTACGGCGGCGATACCGGAGGAGGGGGAGGAGGGTGCGGCGGATTTGGATAAGAGATTTGGGTTCTCCAAGGAGTTCACTAGTAGGTTGGAGGTTGGTGAAGAAGTGGGTCGAGGGCATTTTGGGTATACGTGTTCTGCTAAGTTCAAGAAGGGTGAGCTCAAGGGTCAACAAGTAGCTGTTAAGGTCATACCAAAAGCAAAGATGACAACAGCAATTGCTATTGAAGATGTGAGAAGGGAGGTGAAAATACTGCGAGCTTTGAATGGACACAGCAATCTGATACAGTTCTATGATGCATTTGAAGACCAAGATAATGTCTACATTGTTATGGAGTTATGTGAAGGGGGGGAGCTCTTAGATATGATATTATCAAGAGGAGGGAAATACTCAGAAGATGATGCAAAGGCTGTCATGGTACAGATACTAAATGTTGTTGCATTTTGTCATCTACAGGGTGTGGTACACCGAGATCTTAAGCCGGAGAATTTTTTGTATGCTAAAAAGGATGAAAGTTCTGAGTTGAAAGCTATAGACTTTGGGTTATCAGATTTTGTCAGACCAGATGAAAGGCTTAATGATATTGTTGGAAGTGCATATTATGTGGCCCCTGAAGTTCTCCATAGATCTTATAGCACAGAGGCTGATGTGTGGAGTATAGGTGTGATAGCATATATTCTATTATGTGGCAGTCGTCCATTTTGGGCTCGAACAGAGTCTGGTATTTTTAGGGCAGTTTTGAAAGCTGATCCAAGCTTTGATGAAACACCGTGGCCATCTTTATCTTTAGAAGCTAAAGATTTTGTCAAACGCTTATTGAATAAGGATCCACGGAAGCGAATATCTGCTGCTCAGGCTCTAAGTCATCCTTGGATACGAAATTACAATAATGTAAAAGTTCCACTTGATATTTTAATATTTAAGTTGATGAAGACATATATGAGATCATCATCCTTACGCAAGGCTGCCTTAAGGGCCTTGTCAAAAACATTGACTGCAGATGAACTCTATTATCTGAGGGAGCAATTTGCACTGCTAGAACCAAGCAAAAATGGCAGCATATCTTTAGAGAATGTTAACAAGGCCTTGATGAAATATGCAACAGATGCCATGAAAGAGTCTCGCATCCTTGACTTCCTTTCATCGCTGAACTCGTTACAATATAGAAGGATGGATTTTGAAGAATTTTGTGCAGCTGCATTGAGTGTGCATCAACTTGAAGCTCTTGATCGTTGGGAACAACATGCCCGCTGTGCATATGAACTTTTTGATAAAGACGGAAACAGGGCTATTGTCATTGAAGAGCTTGTTTCAGAACTTGGACTTGGTCCCTCTATTCCTGTTCATGTTGTTCTTCATGATTGGATACGCCACACGGATGGGAAGTTAAGCTTTCTTGGGTTTGTCAAATTATTACACGGTGTATCTAGCCGAAGCCTTGCAAAGGTTCAATGA 1797 0.4641 MGVCTSKPQKPSPYALREAEAEADPSQIPKTPLSPAAADTPRRKDDAITGKRSPFYPFYSPSPARFLKKSPAPAGGSRSASSTPRRFFRRPFPPPSPAKHIRAVLARRQGKKASATAAIPEEGEEGAADLDKRFGFSKEFTSRLEVGEEVGRGHFGYTCSAKFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHSNLIQFYDAFEDQDNVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYAKKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDETPWPSLSLEAKDFVKRLLNKDPRKRISAAQALSHPWIRNYNNVKVPLDILIFKLMKTYMRSSSLRKAALRALSKTLTADELYYLREQFALLEPSKNGSISLENVNKALMKYATDAMKESRILDFLSSLNSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFDKDGNRAIVIEELVSELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRSLAKVQ* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1780 598 PANTHER CDPK-RELATED KINASE 2 41 592 - -
Gso7g1780 598 Gene3D Phosphorylase Kinase; domain 1 146 232 - -
Gso7g1780 598 Gene3D - 431 585 - -
Gso7g1780 598 SUPERFAMILY Protein kinase-like (PK-like) 140 443 IPR011009 -
Gso7g1780 598 CDD STKc_CAMK 145 405 - -
Gso7g1780 598 MobiDBLite consensus disorder prediction 1 98 - -
Gso7g1780 598 ProSitePatterns Protein kinases ATP-binding region signature. 150 176 IPR017441 GO:0005524
Gso7g1780 598 Gene3D Transferase(Phosphotransferase) domain 1 233 418 - -
Gso7g1780 598 Gene3D - 424 515 - -
Gso7g1780 598 ProSiteProfiles Protein kinase domain profile. 144 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1780 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Gso7g1780 598 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 592 - -
Gso7g1780 598 SUPERFAMILY EF-hand 434 588 IPR011992 -
Gso7g1780 598 Pfam Protein kinase domain 145 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1780 598 SMART serkin_6 144 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1780 Gso-Chr7 40264735 40269744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1780 1 594 EF-hand Containing Proteins AT3G50530 71.609 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso7g1780 Pkinase 2.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1780 - K00924 gmx:100798913 1132.09