Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1775 ATGGGTTCGGTTGCCGCAGAAGAACTGAACTTAGATTTAAGATCCTCCTTCGTCCCCAAAACCATCACCGATTTCCTCCGCCACCTCTCCGCCAACAACAACCACCCTGCCACCCTCCGCGATTTCCTCTCCCGCCTCGAAGACGAGCTCCGCAAGATCCACGCCTTCAAACGCGAACTCCCCCTCTCCATGCTCCTCTTAAACGACGCAATTTCCGTTCTGAAGGTTGAATCGCAGAAATGCTGCAGGGTGGCGCGCGATTCGCCGCCGGTGCTGGAGGAGTTCATTCCGTTGAAGAAGGAGCTTGGTGATCAGAGCGAGGAGGAGGAGGAGGAGAATGATGATGACAAGGACGATAACGAATGCAGGGATAAGAGGAATTGGATGAGTTCCGTTCAGCTCTGGAATAACAACACTACCACCACTACTACTAATAACAACAACAATGCCTCTGATCGCAAACAACTACTTCATAAATTACAAACCAAGAAAAGTGAAGAAGGGCAGTCTGTGGCTGAGGATCCTTTTCAGACTTGTAGTAATAGAAATGGGGGAAGAAGGGCATTTATGCCTTTCTCTAGGTACTCTTCTTCATCATCATCTGTGCCGGTGACAACAGTGGGGCTGGGGGCTGCATCCAAAGAAGAGAAGGAAGAGAGTGTTAGGAATAGGCTTTCTCTTCTGACGCCTTCTGTGAAAGAAGGGTGTGGTTCAAGGGGATCAAGGAGCAGTTCTAACAGGGCTGTTTCTTCTTCTCCTCCCACGGCTCAGCCGGGTTTGCGTGCGACTTCGCTTCAGCAGACTGCTAGGAAACAGAGGAGGTGCTGGTCCCCTGAGTTGCACAGACGATTCGTTAATGCCTTGCAGAAGCTTGGAGGTTCTCAAGCAGCTACACCAAAGCAAATTAGAGAGCTTATGCAGGTTGATGGCCTAACTAACGATGAAGTGAAGAGCCATTTACAAAAATACCGACTTCATACGCGGAGAGTTCCTGCTGCAAGTTCTAATCAGCCAGTTGTGGTTCTTGGAGGTTTGTGGATGTCTCAAGATCAGTACAATGACTCTTCAAAAGTTAGCAGTTCAGGGTCAGGTTCTCCTCAAAGTCCTCTTCATTTGGCTGCAGGGTCCCGGGGAGGGACATCTCCTACTGAAGGTGACAGCATAGAAGATGATGAAGATGCAAGATCCGAGAGTTATAGTTGGAAAAGTCATATGAACAAACCAGGAAAAGTTGATGTATAG 1242 0.4887 MGSVAAEELNLDLRSSFVPKTITDFLRHLSANNNHPATLRDFLSRLEDELRKIHAFKRELPLSMLLLNDAISVLKVESQKCCRVARDSPPVLEEFIPLKKELGDQSEEEEEENDDDKDDNECRDKRNWMSSVQLWNNNTTTTTTNNNNNASDRKQLLHKLQTKKSEEGQSVAEDPFQTCSNRNGGRRAFMPFSRYSSSSSSVPVTTVGLGAASKEEKEESVRNRLSLLTPSVKEGCGSRGSRSSSNRAVSSSPPTAQPGLRATSLQQTARKQRRCWSPELHRRFVNALQKLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPAASSNQPVVVLGGLWMSQDQYNDSSKVSSSGSGSPQSPLHLAAGSRGGTSPTEGDSIEDDEDARSESYSWKSHMNKPGKVDV* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1775 413 MobiDBLite consensus disorder prediction 228 273 - -
Gso7g1775 413 MobiDBLite consensus disorder prediction 162 184 - -
Gso7g1775 413 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 406 IPR044787 GO:0003700|GO:0006355
Gso7g1775 413 MobiDBLite consensus disorder prediction 352 370 - -
Gso7g1775 413 MobiDBLite consensus disorder prediction 236 273 - -
Gso7g1775 413 Gene3D - 270 328 - -
Gso7g1775 413 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 268 328 IPR017930 -
Gso7g1775 413 Coils Coil 99 119 - -
Gso7g1775 413 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 271 326 IPR006447 GO:0003677
Gso7g1775 413 SUPERFAMILY Homeodomain-like 268 329 IPR009057 -
Gso7g1775 413 Pfam Myb-like DNA-binding domain 273 324 IPR001005 -
Gso7g1775 413 PANTHER TRANSCRIPTION FACTOR HHO6 8 406 - -
Gso7g1775 413 MobiDBLite consensus disorder prediction 352 413 - -
Gso7g1775 413 MobiDBLite consensus disorder prediction 97 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1775 Gso-Chr7 40145201 40148043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1775 4 347 G2-like Transcription Factor Family AT2G03500 39.011 1.01e-53 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso7g1775 Myb_DNA-binding 3.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1775 - - gmx:100812420 738.799