Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1774 ATGAGTGTTGGGCCGGGAATGGATTTGCCGATCATGCATGACAGTGATCGCTATGAGCTTGTGCGTGACATTGGTTCTGGCAACTTCGGTGTAGCCAGGCTTATGAGGGACAAGCACACCGAGGAACTTGTTGCTGTTAAGTATATTGAGAGAGGTGAAAAGATAGATGAAAATGTACAAAGGGAAATTATAAATCACAGATCACTGAGGCATCCTAACATTGTCAGGTTCAAGGAGGTTATATTGACCCCAACACATTTAGCAATTGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAGAGAATATGCAATGCAGGAAGGTTCAGTGAGGATGAGGCGCGCTTCTTCTTCCAACAACTTATATCAGGGGTTAGCTATTGTCATGCAATGCAAGTATGCCATCGCGACTTGAAGTTGGAAAACACATTGTTGGATGGTAGTCCTGCTCCTCGTTTGAAGATTTGTGATTTTGGCTATTCCAAGTCCTCAGTGCTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATATATTGCTCCAGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGCGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAGGAACCTAAAAATTTCCGTAAGACAATACATAGGATTTTGAATGTTCAGTACTCAATTCCTGACTACGTTCACATATCTTCCGAGTGCCGTCATCTGATATCAAGGATTTTTGTCGCTGATCCTGCAAGGAGAATAACTATTCCTGAGATCAGAAACCACGAGTGGTTTTTGAAGAACCTTCCAAGTGATCTCATGGATGGGAATACCAACAACCAGTTTGAGGAGCCTGATCAACCAATGCAAAGCATAGAAGAAATAATGCAGATAATTAAAGAGGCTACAATTCCTGCAGCTGGATCTCAGTCTCTCAACCATGATCTTACTGGTAGCTTGGATATTGATGATGACATGGATTCGGATCCTGACCTTGACTTAGATAGCAGTGGAGAAATTGTGTATGCTATGTAA 1062 0.4237 MSVGPGMDLPIMHDSDRYELVRDIGSGNFGVARLMRDKHTEELVAVKYIERGEKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISSECRHLISRIFVADPARRITIPEIRNHEWFLKNLPSDLMDGNTNNQFEEPDQPMQSIEEIMQIIKEATIPAAGSQSLNHDLTGSLDIDDDMDSDPDLDLDSSGEIVYAM* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1774 353 SMART serkin_6 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1774 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Gso7g1774 353 Pfam Protein kinase domain 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1774 353 CDD STKc_SnRK2-3 17 273 - -
Gso7g1774 353 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Gso7g1774 353 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 10 348 - -
Gso7g1774 353 Gene3D Transferase(Phosphotransferase) domain 1 94 282 - -
Gso7g1774 353 SUPERFAMILY Protein kinase-like (PK-like) 11 289 IPR011009 -
Gso7g1774 353 Gene3D Phosphorylase Kinase; domain 1 2 93 - -
Gso7g1774 353 ProSiteProfiles Protein kinase domain profile. 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1774 353 PANTHER SERINE/THREONINE KINASE 10 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1774 Gso-Chr7 40123554 40127882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1774 11 284 CBL-interacting serine-threonine protein kinases AT4G24400 43.816 6.49e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gso7g1774 Pkinase 3.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1774 K14498 - gmx:100796253 696.041