Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1763 ATGATAGCCAGCTCCTTCTGCAATGCTGATTCTATGTTTTCAAGAGAAGAGGGGATAGATGTTAGAAAGATGATGGAACATAAAAGGAGCCCCTGCTCTGTTGACCAAAGCAGTTATACTTCTATTGCCTCCAAAAGGCAAAAGGCTGATTTATCGATCAGCACTAAGGAGAGGAAGGAAAAGATTGGCAAACGAATTGTTGCTCTTCAGCAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCAATGGAATACATAGGATTCCTTCATAAACAACTGCTTAGTGCTCCATACCTTGAAAGTTCACCAGCAGCAAAGATGCAGGGTATGGAGCCATGCAGCCTGAGGAGTAGAGGGTTATGTCTTGTTCCTGTGTCATTTACTATTGGAGTTGCTGAGACCAATGGTGCAGATATCTGGGCTCCCATTAAGACTACTACTTCTCCTAAATTTGAGAAGGATGTCTCCCAATTTCATTGA 498 0.4237 MIASSFCNADSMFSREEGIDVRKMMEHKRSPCSVDQSSYTSIASKRQKADLSISTKERKEKIGKRIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQLLSAPYLESSPAAKMQGMEPCSLRSRGLCLVPVSFTIGVAETNGADIWAPIKTTTSPKFEKDVSQFH* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1763 165 Gene3D - 43 109 IPR036638 GO:0046983
Gso7g1763 165 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 101 IPR036638 GO:0046983
Gso7g1763 165 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Gso7g1763 165 CDD bHLH_AtbHLH_like 52 99 IPR045239 -
Gso7g1763 165 PANTHER TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 13 147 - -
Gso7g1763 165 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 13 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1763 Gso-Chr7 39947616 39952757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1763 24 157 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 53.165 1.96e-52 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1763 - - gmx:100809747 322.398