Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1760 ATGAACGTGACCGTTGATTCCGCGCTCTTCGCGTTTCTCTTCCCCTCGGCGTGGGAAATCAAAGTCGCCGTCGCCGCGTCCGTCTTCGTCATCCTCGCCTACCGCTTCTTCGCCGTCCGGACCGGATACGCCGATCCGTCGCTCACCGACAATTCCGCCGGTGATGTTGCCGACGAAAAGGACAAGATGGGTCAGTCTAAAGTGGATTCTCAAGCCAGTTTGGCGTATCTGATCAAGTTAGAACTGTTGGCTGCCAAGAATCTTGTCGGTGCAAACTTAAATGGAACATCGGATCCTTATGCTATAATCACATGTGGCAATGAAAAGCGATTCAGTTCCATGGTCCCTGGTTCAAGAAATCCAATGTGGGGTGAGGAGTTCAATTTTTCTGTTGATGAACTTCCTGTCCAGATCAATGTCACAATTTATGATTGGGATATAATTTGGAAAAGTGCTGTTCTAGGTTCAGTGACTGTTCCAGTTGAAAGTGAAGGTCAAACTGGTGCAGTGTGGCATACTTTGGATAGCCCATCTGGGCAGGTTTGTCTTCATATAAAAACAATAAAACTATCTGGAAATGCTTCCAGGATAAATGGTTATGGGGGAGCCAACCCTCGAAGAAGGATGCCTCCCTTGGAAAGCCAGGGGCCCACTGTAGTCCATCAAAAGCCAGGGCCTCTTCAAACTATATTTGGTCTTCATCCAGATGAGGTTGTTGATCATAGTTATTCTTGTGCACTTGAGAGGTCATTCTTGTACCATGGTCGTATGTATGTCTCAGCATGGCATATTTGTTTCCATTCCAATGTCTTCTCTAAGCAAATGAAGGTGGTTATTCCATTTGAAGATATAGATGAGATACGAAGGAGTCAACATGCATTTATTAATCCTGCTATAACAATTATTCTTCGCATGGGTGCCGGTGGACATGGTGTCCCTCCTTTGGGAAGTCCTGATGGTAGGGTCAGATATATGTTTGCATCATTTTGGAACAGGAACCATGCATTAAGAAATCTACAGCGTGCAGCAAAGAATTTCCATGAAATGTTGGAAGCTGAGAAGAAGGAAAATGCAGAGTCAGAGCTGCGTGCACATAGTAGTTCTGTCAGAGGAAATAAGATACTGGACAAGGCTCCTGAAGAAAGCATGCCAAAAACTGGAAGACTTCAACCTTTTGTCAAAGAAGAGGCTTTAGTTGGTATATACAATGATGTTTTTCCCTGCACAGCTGAGCAGTTTTTTAACTTGTTATTGAATGATGGTTCAAATTTTACTAGCAAATATCGTTCAGTACGAAAGGACACTAATCTTGTGATGGGTCAGTGGCATACAGCAGATGAATACGATGGACAAGTCCGAGAGATAACCTTCAGATCCCTTTGTAACAGCCCCATGTGCCCTCCGGACACAGCCATGACAGAGTGGCAACATCATGTTCTATCACTAGACAAGAAAAACCTGGTGTTTGAGACTGTGCAACAGGCACATGATGTTCCATTTGGATCCTACTTTGAGGTACACTGTAAATGGAGCTTGGAGACAATTAATGAAATCTCATGTACTCTGGACATAAAAGTCGGTGCGCATTTCAAGAAATGGTGTGTTATGCAATCCAAAATAAAGTCAGGGGCAGTCAATGAGTACAAGAAAGAAGTTGATGTGATGTTAGATGTTGCTCGGTCGTATATAAAATCAAATACTCCTAATGATGAGGACGATAAGGCCTCTTCGCCCCCTGCAGCGACAGTGGAAAGCTAA 1758 0.4403 MNVTVDSALFAFLFPSAWEIKVAVAASVFVILAYRFFAVRTGYADPSLTDNSAGDVADEKDKMGQSKVDSQASLAYLIKLELLAAKNLVGANLNGTSDPYAIITCGNEKRFSSMVPGSRNPMWGEEFNFSVDELPVQINVTIYDWDIIWKSAVLGSVTVPVESEGQTGAVWHTLDSPSGQVCLHIKTIKLSGNASRINGYGGANPRRRMPPLESQGPTVVHQKPGPLQTIFGLHPDEVVDHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVVIPFEDIDEIRRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYMFASFWNRNHALRNLQRAAKNFHEMLEAEKKENAESELRAHSSSVRGNKILDKAPEESMPKTGRLQPFVKEEALVGIYNDVFPCTAEQFFNLLLNDGSNFTSKYRSVRKDTNLVMGQWHTADEYDGQVREITFRSLCNSPMCPPDTAMTEWQHHVLSLDKKNLVFETVQQAHDVPFGSYFEVHCKWSLETINEISCTLDIKVGAHFKKWCVMQSKIKSGAVNEYKKEVDVMLDVARSYIKSNTPNDEDDKASSPPAATVES* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1760 585 ProSiteProfiles C2 domain profile. 59 174 IPR000008 -
Gso7g1760 585 Pfam C2 domain 79 173 IPR000008 -
Gso7g1760 585 ProSiteProfiles VASt domain profile. 397 567 IPR031968 -
Gso7g1760 585 SMART C2_3c 77 173 IPR000008 -
Gso7g1760 585 Gene3D C2 domain 58 191 IPR035892 -
Gso7g1760 585 SMART gram2001c 225 291 IPR004182 -
Gso7g1760 585 MobiDBLite consensus disorder prediction 564 585 - -
Gso7g1760 585 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 8 578 - -
Gso7g1760 585 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 76 187 IPR035892 -
Gso7g1760 585 Gene3D - 226 345 IPR011993 -
Gso7g1760 585 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 8 578 IPR044655 -
Gso7g1760 585 Pfam VAD1 Analog of StAR-related lipid transfer domain 401 546 IPR031968 -
Gso7g1760 585 Coils Coil 336 356 - -
Gso7g1760 585 CDD C2 78 174 - -
Gso7g1760 585 Pfam GRAM domain 228 296 IPR004182 -
Gso7g1760 585 PRINTS C2 domain signature 93 105 IPR000008 -
Gso7g1760 585 PRINTS C2 domain signature 117 130 IPR000008 -
Gso7g1760 585 PRINTS C2 domain signature 138 146 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1760 Gso-Chr7 39896291 39920010 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1760 65 162 C2H2 Transcription Factor Family AT4G21160 23.469 1.18e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1760 - - gmx:100789923 1194.49