Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1729 ATGATTTCTTTCGTGTCCTTTCCAACGTCTCTTCCCGCCATTAACTTCTCCGGCAACGCCATGGCTTCATCGTCGTGCCGCGTCAAATCCCAGCCAATAGTCGCCTTTGCCACTGTCACTGCCACCGTTGAAGCTCACTCTTCCTGGATAGAGCAACCGAGACCTTCGTATCTGAACTCCTCTTGCTCTTTGCTTTACGGTATCCTCGGCATCCCCGTCGGCGCCTCTAACCAAGAAATCAAGGCCGCATACCGACGATTAGCCAAAGTCTGCCACCCCGATATGGCGGCCATCGACCAAAAAAACTCGTCCGCTGACGAATTCATGAAGATCCACACCACATACTTTACTTTTTCCGATCCCAACAAGCGTGCTAACTACGATCAGAACCTATTCTGGCAACAACGTTCTAGAGACCAGCCGTAG 426 0.5141 MISFVSFPTSLPAINFSGNAMASSSCRVKSQPIVAFATVTATVEAHSSWIEQPRPSYLNSSCSLLYGILGIPVGASNQEIKAAYRRLAKVCHPDMAAIDQKNSSADEFMKIHTTYFTFSDPNKRANYDQNLFWQQRSRDQP* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1729 141 CDD DnaJ 66 120 IPR001623 -
Gso7g1729 141 SMART dnaj_3 63 123 IPR001623 -
Gso7g1729 141 Pfam DnaJ domain 65 128 IPR001623 -
Gso7g1729 141 ProSiteProfiles dnaJ domain profile. 64 131 IPR001623 -
Gso7g1729 141 PANTHER - 1 137 - -
Gso7g1729 141 Gene3D DnaJ domain 56 140 IPR036869 -
Gso7g1729 141 SUPERFAMILY Chaperone J-domain 65 133 IPR036869 -
Gso7g1729 141 PRINTS DnaJ domain signature 66 84 IPR001623 -
Gso7g1729 141 PRINTS DnaJ domain signature 84 99 IPR001623 -
Gso7g1729 141 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gso7g1729 141 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1729 Gso-Chr7 39512550 39512975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1729 66 130 C2H2 Transcription Factor Family AT1G74250 37.681 7.76e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1729 - - gmx:100781392 278.1