Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1723 ATGTCTTCTTCCAACAGACACTGGCCAAACATGTTCAAATCCAAGCCTTGCAATAATCCCCATAACCAATGGCAGCATGACATCAACTCCTCTATAGTTTCCACCGGAGGATACCAAAGAAGCCCTTATGCTTCAGGAGGTGAAGAGAGAACTCCAGAACCAAAGCCAAGATGGAACCCAAAACCGGAGCAAATCCGCATTCTGGAAGCCATCTTCAATTCTGGGATGGTGAATCCCCCAAGGGATGAGATAAGGAAGATACGGGTGCAGTTGCAAGAGTATGGCCAAGTGGGTGATGCCAATGTCTTCTACTGGTTCCAGAACCGTAAGTCCAGGAGCAAGCACATGCTCCGCCACTTCCAAAACTCGATGAACCAAAACCATAATGCAGAAGCACAACAACAACAGAAGGTTGATGCTTCTTCTCTCTCTCAGACCACACCACCTTCTTCCTCATCCTCTTCATCTGACAAATCATCTTCAAAGGAATTAGCATACCCTATTGGATTCTCCTTTGGCTTCTCAAATGTCAATGATGTTGCAGTGCCTAATTCTCCCGCTGCTTCTGTGAATCAGACTTATTTTCAGCCTCATAACCACATTGACAACAATTTGCTACCACAAGCTACTGAGCCTTTTTCCTTTACCATGCACAACAATAATGTGCAAGGTGTAGTGGATAAAAATACCATAACAACACTTGGGTTTTCTGTCCCTCAATTCTCCAGCAATATGATGCAATCTCAACTTCAGTGTCAACAAAATGTTGGGCCTTGCACTAGTCTTTTGCTTAATGAAATCATGAATTATGGAACCTTGTCAAAGAAAGACCAAGATGAAGACAAGGCATTGAAGATAACGCATCCACAACTTAGTTTCCCTCTCACTTCAACTCCTCCAACCACAACCATTGCTCCTTCAATCTCAACCGTTCCATGTCCCATCACTCAACTTCAAGGTGTTGGTGAGGTTGCAGGAGATAGGGCAAAATGTACAGTGTTCATTAATGGTGTTGAATTTGAGGTTGTGATGGGACCCTTCAACGTGCACCAAGCCTTTGGAGATGAAGCCGTGCTTATCCACTCTTCCGGCAATCCTGTTCCTACCGATAAGAGAGGCATTACCCTTCACCCACTGCACCATGGTGCTTATTACTATTTGGTTTAA 1167 0.443 MSSSNRHWPNMFKSKPCNNPHNQWQHDINSSIVSTGGYQRSPYASGGEERTPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSKHMLRHFQNSMNQNHNAEAQQQQKVDASSLSQTTPPSSSSSSSDKSSSKELAYPIGFSFGFSNVNDVAVPNSPAASVNQTYFQPHNHIDNNLLPQATEPFSFTMHNNNVQGVVDKNTITTLGFSVPQFSSNMMQSQLQCQQNVGPCTSLLLNEIMNYGTLSKKDQDEDKALKITHPQLSFPLTSTPPTTTIAPSISTVPCPITQLQGVGEVAGDRAKCTVFINGVEFEVVMGPFNVHQAFGDEAVLIHSSGNPVPTDKRGITLHPLHHGAYYYLV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1723 388 MobiDBLite consensus disorder prediction 128 161 - -
Gso7g1723 388 MobiDBLite consensus disorder prediction 1 41 - -
Gso7g1723 388 SMART HOX_1 53 120 IPR001356 GO:0003677
Gso7g1723 388 Gene3D - 55 121 - -
Gso7g1723 388 CDD homeodomain 54 116 IPR001356 GO:0003677
Gso7g1723 388 MobiDBLite consensus disorder prediction 1 60 - -
Gso7g1723 388 Pfam Homeodomain 55 115 IPR001356 GO:0003677
Gso7g1723 388 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 388 IPR044557 GO:0003700|GO:0050793
Gso7g1723 388 ProSiteProfiles 'Homeobox' domain profile. 51 116 IPR001356 GO:0003677
Gso7g1723 388 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 388 - -
Gso7g1723 388 SUPERFAMILY Homeodomain-like 49 121 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1723 Gso-Chr7 39401145 39403680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1723 1 388 Wox Gene Family AT5G45980 38.404 4.90e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso7g1723 Homeodomain 3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1723 - - gmx:100777643 739.184