Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1713 ATGACATGGTGCAATGACTCAGATGAGGAGAGGGGAATTGATCAACTGGTTGCACCAACAATTACTCCTACTTCAACTAATAACACTACTGTTCTTACTGATCATCGCACAAAAGCAAGCGAAATTCGCACCTTAACTTGCCCCTCATGTGGCCAAAACATTGAATTCCAAGACCAGACTGGAATCAATGACTTGCCGGGGTTACCAGCTGGGGTGAAGTTTGATCCGAATGACCAAGAGATATTAGAGCATTTGGAAGCAAAGGTACTGTCTGACGTGCCAAAGCTTCATCCACTTATTGATGAGTTCATACCAACGCTTGAAGGAGAGAATGGGATCTGTTATACGCATCCAGAAAAGCTTCCAGGTGTAAGAAAAGATGGACAAATCCGCCACTTCTTTCACAGGCCATCTAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCACACCGACGAAGAAGGAAGCGAGACAAGGTGGCACAAAACAGGAAAAACTAGACCAGTTTTTGTTGGTGGTGCTGTGAAGGGGTTCAAGAAAATCCTAGTCCTCTACACCAACTATGGAAGGCAAAAGAAGCCTGAGAAGACCAATTGGGTGATGCATCAATACCACCTTGGCACTAGCGAAGAAGAGAAAGATGGAGAATTGGTGGTTTCAAAGGTTTTCTACCAAACACAACCTCGACAATGTGGTAATTCCATTATAAAGCAGGATCTTTATGATGAAGAAAGATTGATGACTAACCAAAGTGTCCATAATGATGATGACAACAATATAATACCTAGAAATAATAATGCAAGTGCTCTTATGGACTACTACAATCCTTCTTTCATAAATTATGACCAATTGGGTGGTCGTAGTAATAGGGAAAATTCACCTCAACTTATTCCAAATTTGGTCATGCAAGGTGATAGCTCTTCTTTCATTCGATTAGCAATGGATGCAACCAAAGCCAAGATGGACAGAAAATAG 981 0.4139 MTWCNDSDEERGIDQLVAPTITPTSTNNTTVLTDHRTKASEIRTLTCPSCGQNIEFQDQTGINDLPGLPAGVKFDPNDQEILEHLEAKVLSDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVRKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGTSEEEKDGELVVSKVFYQTQPRQCGNSIIKQDLYDEERLMTNQSVHNDDDNNIIPRNNNASALMDYYNPSFINYDQLGGRSNRENSPQLIPNLVMQGDSSSFIRLAMDATKAKMDRK* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1713 326 ProSiteProfiles NAC domain profile. 68 227 IPR003441 GO:0003677|GO:0006355
Gso7g1713 326 Pfam No apical meristem (NAM) protein 69 208 IPR003441 GO:0003677|GO:0006355
Gso7g1713 326 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 310 - -
Gso7g1713 326 Gene3D NAC domain 77 231 IPR036093 GO:0003677|GO:0006355
Gso7g1713 326 SUPERFAMILY NAC domain 64 227 IPR036093 GO:0003677|GO:0006355
Gso7g1713 326 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 310 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1713 Gso-Chr7 39244987 39248981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1713 1 237 NAC Transcription Factor Family AT4G28500 70.588 4.55e-125 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso7g1713 NAM 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1713 - - gmx:100795920 650.203