Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1712 ATGAACCATGACACGTACATTGCTTATGATGTGGTCATGGTTGCTCTATCCATATCCTTCTTTGTTCTTGCTGTTGTTCTCTACCTTGTGTGTAAGAAGAAACCGGTTAACGTTGAATCCGAAGAAACACTTGCATTGAAGCATTGTGTTCGTGCATACTCATTGATGGACATTGATGCTGCCACTGATGGCTTCGACCATAGCAGAATTGTGGGGAAGGGTCGCGTAGGAACCGTGTATGCCGCGGTGCAAGAGAATGGAGAACTTGTGGCTGTGAAAAGGATTCATTCTGTGCTTGTGTTGAGCAATGCAGGATTTGGATTCTCATCAGTGTTGAAATGGCTCTCTTCAGCTCACCACCCCAACATAGTTCCCATCATAGGATTCTCGGAGGCACCTGGTGAGAGGATCATAGTGATGGAGTTTGGGCGCATGGTGAGTTTGGACTTCTATTTGCACCAAAATGTTAATGGGGCATCACTCTTGGATTGGAACAAGAGGATCAGAATTGTGGCTGGAGCAGCTAGAGGGATTCAGTACCTGCATGAAGTGGCAACACCAAACATTGTACATGGGTGTGTCAAGTCCTCAAATGTTTTAATTGATGTCAACTTTTGTACTAGGATTTGTGATTATGGACTCAACTTCTTGGCACCCCGAGAAAAGAGAGGGCTAGTAGGGAATGTGGATGATGAGTATTGGAATGAAGAAGGGGGTGGTGCTAGCAAGGAAAGTGACGTTTATGGGTTGGGGGTGGTCATGCTTGAGCTATTAAGTGGTAGAGGGTGTGAGGAAGGATTGATAGCAAAATGGGCAATGCCTTTGATCAAGGAAATGAGTTTTGGTGAACTTTTGGATGCTAGGTTGGTGATTCCTTCTGACATGAAGCCTCTTGTTAGGTTAGCTAAAGTTGCTTTAGCTTGTGTTGGTAATTCAAGGAAGTGTAGGCCTTCCATTGCTCAAGTGACAACTATTTTGAACAATATAGAGATGGAAGTGTGCATATGA 1008 0.4435 MNHDTYIAYDVVMVALSISFFVLAVVLYLVCKKKPVNVESEETLALKHCVRAYSLMDIDAATDGFDHSRIVGKGRVGTVYAAVQENGELVAVKRIHSVLVLSNAGFGFSSVLKWLSSAHHPNIVPIIGFSEAPGERIIVMEFGRMVSLDFYLHQNVNGASLLDWNKRIRIVAGAARGIQYLHEVATPNIVHGCVKSSNVLIDVNFCTRICDYGLNFLAPREKRGLVGNVDDEYWNEEGGGASKESDVYGLGVVMLELLSGRGCEEGLIAKWAMPLIKEMSFGELLDARLVIPSDMKPLVRLAKVALACVGNSRKCRPSIAQVTTILNNIEMEVCI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1712 335 Gene3D Transferase(Phosphotransferase) domain 1 145 333 - -
Gso7g1712 335 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 2 334 - -
Gso7g1712 335 SUPERFAMILY Protein kinase-like (PK-like) 46 326 IPR011009 -
Gso7g1712 335 Pfam Protein kinase domain 67 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1712 335 PIRSF ILK 37 334 - -
Gso7g1712 335 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 334 - -
Gso7g1712 335 ProSiteProfiles Protein kinase domain profile. 65 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1712 335 Gene3D Phosphorylase Kinase; domain 1 28 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1712 Gso-Chr7 39227201 39228975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1712 42 326 Receptor kinase-like Gene Family AT3G59420 39.333 6.68e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso7g1712 Pkinase 9.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1712 - - gmx:100795393 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1712 7 39227201 39228975 Gso15g0671 15 6010188 6012044 PCT
Gso7g1712 7 39227201 39228975 Gso11g2617 11 42151046 42152790 PCT
Gso15g0671 15 6010188 6012044 Gso7g1712 7 39227201 39228975 PCT
Gso11g2617 11 42151046 42152790 Gso7g1712 7 39227201 39228975 PCT