Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1708 ATGGAGGGCGAGGGTTGTTCAGAGGGAGAGAATAATCGGAAAAGGGGTGGCTCTGATGATGATAGCAATGAGAATAACAACAACAACAATAACGGAAGCAGTGGCAAGATTGTGAATTCTAATGAGGGGCAGAGCAAGCCCAAGCGCCAGATGAAAACCCCTTTTCAGCTTGAAACCCTCGAGAAGGCTTATGCTGTGGATAATTACCCTTCGGAGACGATGAGGGTGGAGCTGTCTGAGAAATTGGGGTTGTCAGATCGACAGCTTCAGATGTGGTTCTGCCACAGGAGGTTGAAGGACAAGAAGGACTTGCCGTCTAAGAAGCCACCACGGAAGGTGCTGGCAGAGCCATTGCCGGATTCGCCAAGGGACGACCCCAGGTTGAGCCTTGAGCTTGCTAATGAATATGGATCCGGGTCCGGTTCAGGTTCCAGCCCGTATGCCCGAGTGGAGCCCCTGAATGTGGTTCCTCGGTGTGTGCCTGGTTATTATGAGTCCCCACAGGCTAAGTTGGAGCTTAGAGCAATTGCTTGTGTCGAGGCGCAGTTAGGGGAGCCATTGAGGGATGATGGACCGATTCTAGGGCTAGAGTTTGATCCATTGCCACCAGATGCCTTTGGGGCACCTATAGTTACAGAACAGCAGAAGCTACCTAGTTTTGCCTATGACAGTAAAATATATGAAAGACATGATGCTAGAACAAATAAGGCTTTGGCAAGGACATTCCGTGACAATCAATTTCTACCAAACAAGTCTGGCATTAGGTCTGATGCTTCTGGACAGTTCAGCCAATCTCATTTACACGATCCAATTGAAGGTTTTGTCAGAAATCCTCCTTTTGCACATGGAAATGAACATCTACCTAGAATTCATGCTACTAAAGGTCATTCTTCTCGTGTTCGTCTCTTGTCTCAACAAGACAAGCAATTGATTCCCTATCAATCTCCTTCTCGGGATGATGATGCTGCCCCTCAAAGGGAATTGTACCCAAACATAGCTAATGCTGGAAAGAACTCTCACTCTACTGGTCACCAAATTGTTGGGCCAGAAAATCTCCATGCTCTACCTAGTGTACAAGTTTTGCATAACAATGCTACATGGATTGAGAAGAAACGAAAGAGTGATGATGCCCACGATGTTGAAGCCCACGAGATGAAAATCCGGAAAGAGCTTGAGAAACAAGACAACCTCAGACGAAAGAGTGAAGAGCGGACAAGAAAAGAAATGGAGAGACAGGATCGTGAAAGAAAGAAGGAAGAAGAAAGGTTGATGCGTGAGAGACAGCGAGAGGAGGAAAGAGCAAGACGTGAGCAAAAACGTGAAATGGAGCGAAGGGAAAAGTTTTTGCTGAAAGAAAATTTAAAAGCAGAGAAAACCAGGCAAAGAGAAGAGCTTCGCAAAGAGAGAGAAGCAGAGAGAAGGAAAGCTGCTCTTGAGAAGGCAACTGCTCGTAGAATGGCCAAGGAATCTATGGAACTTATTGAGGATGAACAGCTGGAAATGATGGAGTTGGCTGCCTCAAGCAAGGGGTTTTCCTCTATTGTCCATCTTGATTTTGATACTCTGCAACACATTGAGTCATTTAGGGATTCATTGTGTGTTTTCCCACCAAAGAGTGTAAAGCTAAGAAAACCATTTGCAATCAAACCCTGGATCAACTCAGAAAACAATGTTGGCAATCTTCTCATGGTTTGGAGATTTTTGATCAACTTTGCTGATGTTCTAGAGTTATGGTCTTTTACTCTAGATGAGTTTGTTCAAGCATTTCATGACTATGACTCAAGATTGTTGGGTGAGATACATGTTTCTCTTCTTAAGGTGATAATAAAGGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGAGCGAATCAAAATGGTGCTGCTAACACTGGAGGTGGCCATCCAGAGATTGTGGCAGGCGCGTATGCATGGGGTTTTGACATACGAAATTGGCACAAGCACTTAAATCTGTTGACATGGCCAGAAATTTTCCGACAGCTAGCATTATCTGCTGGATATGGACCACAGTTGAAGAAAAGAAGTATTTCTTGGTCATATGCAAATAATAAAGATGAGGGCAGAAGTTGTGAAGATATCATTTCTACACTTCGTAATGGTTCAGCGGCTGAAAATGCAGTTGCAAAAATGCATGAGAGAGGTCTGTTAGCCCCTCGAAGATCTAGACATCGATTAACTCCTGGTACAGTTAAGTTTGCAGCATTTCATGTTCTCTCGCTTGAGGGTGAGAAGGGATTGAATGTACTAGAACTTGCAGAAAAAATTCAGAAATCCGGTCTTCGAGACCTGACGACCAGCAAGACTCCTGAGGCATCGATTTCTGTTGCTTTAACCAGAGATGCCAAGCTTTTTGAAAGAATAGCTCCATCAACATATTGTGTACGTGAGGCATTTAGAAAGGATCCTGCTGATGCTGAGTCCATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGGTGAGGATGCTGATGATGTTGAAAGAGGAGAGTCAGAAAGTGATGAAATTGATGAGGATCCTGAAGTTGATGATTTGGTAAATCCAACAAGTGCTAACAAAACATCTGAACAGTGTGATGATTTCTCATCAAATGGAAAAGAAAATTTGGGTCATAATGTTGAACTGCAAGGTGAGTTTGATAAGAATCTTCCTTGTTTTCCTGAGAGTGGTTCCAAGAATGCTGATGCTCCAATTGCTGTAACTGGACAATCTGGTGCTTGTGAAGATCTGGATGTTGGAAATCTTGGTGAAGATAATATGGAAATTGATGAAAGAAAGCCTGGAGAGTCATGGGTTCAAGGGCTTGCAGAAGAAGAATATTCTGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTTGCTGTGTTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAACAAATGTGGGCAGAAGCACAAGTAGATAAAGTTCGTCTAAAAGATGATACTTTCAGTAAATCTGACTTTCCGTCTATCAATGGGAATAAAGTTGAAATACAATATTCTTGTCCTGTCACGGAGGGCAAGCAAAGCCCATTGCTTGGCATTAATATTGGCAATAATATTAATAATAGTGTGCCCTCTCCTAGCATTGCGGAAAATCATAAAGCAGCTTCTGGTTCACAGAGCCTGTCTGTTGAAAAACACTCTTCAGTTCAAGATCTTTGCACTGGTCCAGATAACCCTCAGGCTCAGTCATTTGTACAATATTCAAAAAGGTCACGTTCTCAGTGGAAATCTTATATTTCCCACATGGCAGAAGAGATGTATGTCTACAGATCCTTACCCCTCGGGCAAGATCGCAGACGTAACCGTTATTGGCAATTTGTTGCATCTGCTTCTTCCAATGATCCTGGTTCTGGCAGAATCTTTGTTGAATATCTTGATGGCAATTGGAGGCTTATTGATACTGAAGAGGCATTTGATGTGCTTCTTAATTCACTTGATTCACGTGGGATCAGGGAATCTCATTTGCGTCTAATGTTGCAAAAGGTTGAGATTTCCTTTAAGGAGAATGTTCGTCTGAATACTCAATGTTCCAAAATTGGAAGCATAGGTGAAACATGTGTTAAAAATGAAGCTGATGAAACAGATTCCAGTCCTGATCGGCATACTGGATCTGACAGTCCTAGCAGTACCCTTTGTGGCTTGAATTCTGACACTTCAGAAACTTCATCATCCTTCAAAATTGAGCTTGGGAAAAGTGAGAGTGACAAGAAATCTGCCTTGAGAAGGTATCAAGATTTTCAAAAATGGATGTGGAAAGAATGCTATAACTCACCAATATTGTGTGCAATGAAATATGGGAAGAAGAGATGCAAACCTCAGGTTGTCATCTGTGATATCTGTCTCAACCCTTATTTCTTTGAAGACTCCCATTGCAGTGGTTGCCACCAGACATTTTCCTCAAATAGTGGATTTAGTTTTTCTAAACATGCATTTCAATGTGGAGATAAATTATCGAAAAATATTTGTATTTTGGATTCTTCTCTTCCCTTACGGACAAGATTGCTGAAAGCCATGCTAGCTTTTATTGAGGTATCTGTTCCGCCTGAAGCATTTCAATCAAATTGGACAGAAGATATTAGGAGGCATTGGAGTGTGAAGTTGAGCAAATCATCTTCTGTTGAGGAACTGCTACAGATATTGACCTTACTTGAGAGAGCATTGAAGCGAGACTTTTTATCATCAACCTTCTCTACAACAGGGGAACAGTTGGGTTTGAACAGTATGTCAAAGAGTGCTGCACAGACCTCCACTGATCCTGAATCAGTTGCTGTACTTCCATGGGTTCCACTGACCACTTCAGCTGCGTCTCTCAGACTTCTTGAGTTTGATGCATCCATTGTCTACGTACCGCATGAGAAACCTGAACCTTGTGAGGAGAAAGAAGATAGGGTATACATGAAGCTTCCTTCAAGATATAATCCTTCTAAATCTAGTAAAGCGGCTGAAGCAGCAGACTTGGACCATGACGAATTCATGAAAGTTAAATCTGCTTCTGTGAAGATTGTGCAAAGCAACAATAAACGAGGACGAGGGAGTCGTGATAAAGGACGGGGTAAAAAGCTATCTAAAACCAAACAAAATACTGGCCATCGTGGTGCTAAGGTTGCTGGGAATGCAAGTCAAAGGATAAAACAACAGGAAGTGGGATCACAAGGACAAGCTGGTGGACGTGGTCGCCGAACAGTTAGGAAAAGAAGAGTGGGGAAGAAGGCTGTTGAAGATTTGTTGCTGGGCCATAGGGGTGCCACTCATAGCTCGAGCATTGGTAGAGAATCGTTGAGAAGCATGGATGAGGACTGGGATGATGAAAAGGCAAGTCCCGTGACACCCATCCACATGGGGGCTGCTAACAATAGTAACAGCATTGAAGAGGCTGAATCTGATGACAATGTTCAAGCAATGGAGTCTGATGACAATGTCCAAGCAATGGAATCTGATGACAACGAACAAGCTGCAGAATCTGATGACAATGGTCAAGCTGTGGAATATGATCAAGGAAACTGGGAAATAGGTTTTAATGGTGCCCCTAGCAGATGGAGTAGGGATTTGGTTGGAATGAGTGATGATGATGTGGAAGCTTCTGAAGACGATGATGACAATGACAATGTCATTGGCATTGAAAACAATGGAGAGGAGGATTCAGAGGCAGATGCTATGAGTGAGGAGGGTTCAGATGGTACAGCAAACAGAATTGTAAATGAAGAAAGCTCAGAGTCGGATGTCTCTGAAGATTCTTCTGATTAG 5343 0.4278 MEGEGCSEGENNRKRGGSDDDSNENNNNNNNGSSGKIVNSNEGQSKPKRQMKTPFQLETLEKAYAVDNYPSETMRVELSEKLGLSDRQLQMWFCHRRLKDKKDLPSKKPPRKVLAEPLPDSPRDDPRLSLELANEYGSGSGSGSSPYARVEPLNVVPRCVPGYYESPQAKLELRAIACVEAQLGEPLRDDGPILGLEFDPLPPDAFGAPIVTEQQKLPSFAYDSKIYERHDARTNKALARTFRDNQFLPNKSGIRSDASGQFSQSHLHDPIEGFVRNPPFAHGNEHLPRIHATKGHSSRVRLLSQQDKQLIPYQSPSRDDDAAPQRELYPNIANAGKNSHSTGHQIVGPENLHALPSVQVLHNNATWIEKKRKSDDAHDVEAHEMKIRKELEKQDNLRRKSEERTRKEMERQDRERKKEEERLMRERQREEERARREQKREMERREKFLLKENLKAEKTRQREELRKEREAERRKAALEKATARRMAKESMELIEDEQLEMMELAASSKGFSSIVHLDFDTLQHIESFRDSLCVFPPKSVKLRKPFAIKPWINSENNVGNLLMVWRFLINFADVLELWSFTLDEFVQAFHDYDSRLLGEIHVSLLKVIIKDIEDVARTPSTGLGANQNGAANTGGGHPEIVAGAYAWGFDIRNWHKHLNLLTWPEIFRQLALSAGYGPQLKKRSISWSYANNKDEGRSCEDIISTLRNGSAAENAVAKMHERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGEKGLNVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYCVREAFRKDPADAESILSEARKKIQIFENGFLAGEDADDVERGESESDEIDEDPEVDDLVNPTSANKTSEQCDDFSSNGKENLGHNVELQGEFDKNLPCFPESGSKNADAPIAVTGQSGACEDLDVGNLGEDNMEIDERKPGESWVQGLAEEEYSDLSVEERLNALAVLVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQVDKVRLKDDTFSKSDFPSINGNKVEIQYSCPVTEGKQSPLLGINIGNNINNSVPSPSIAENHKAASGSQSLSVEKHSSVQDLCTGPDNPQAQSFVQYSKRSRSQWKSYISHMAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEYLDGNWRLIDTEEAFDVLLNSLDSRGIRESHLRLMLQKVEISFKENVRLNTQCSKIGSIGETCVKNEADETDSSPDRHTGSDSPSSTLCGLNSDTSETSSSFKIELGKSESDKKSALRRYQDFQKWMWKECYNSPILCAMKYGKKRCKPQVVICDICLNPYFFEDSHCSGCHQTFSSNSGFSFSKHAFQCGDKLSKNICILDSSLPLRTRLLKAMLAFIEVSVPPEAFQSNWTEDIRRHWSVKLSKSSSVEELLQILTLLERALKRDFLSSTFSTTGEQLGLNSMSKSAAQTSTDPESVAVLPWVPLTTSAASLRLLEFDASIVYVPHEKPEPCEEKEDRVYMKLPSRYNPSKSSKAAEAADLDHDEFMKVKSASVKIVQSNNKRGRGSRDKGRGKKLSKTKQNTGHRGAKVAGNASQRIKQQEVGSQGQAGGRGRRTVRKRRVGKKAVEDLLLGHRGATHSSSIGRESLRSMDEDWDDEKASPVTPIHMGAANNSNSIEEAESDDNVQAMESDDNVQAMESDDNEQAAESDDNGQAVEYDQGNWEIGFNGAPSRWSRDLVGMSDDDVEASEDDDDNDNVIGIENNGEEDSEADAMSEEGSDGTANRIVNEESSESDVSEDSSD* 1781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1708 1780 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 943 985 IPR028942 -
Gso7g1708 1780 ProSiteProfiles DDT domain profile. 555 614 IPR018501 -
Gso7g1708 1780 Pfam HB1, ASXL, restriction endonuclease HTH domain 737 805 IPR007759 GO:0006355
Gso7g1708 1780 MobiDBLite consensus disorder prediction 862 877 - -
Gso7g1708 1780 MobiDBLite consensus disorder prediction 1645 1660 - -
Gso7g1708 1780 MobiDBLite consensus disorder prediction 1 56 - -
Gso7g1708 1780 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1123 1195 IPR028941 -
Gso7g1708 1780 MobiDBLite consensus disorder prediction 1530 1780 - -
Gso7g1708 1780 MobiDBLite consensus disorder prediction 1 21 - -
Gso7g1708 1780 Coils Coil 380 400 - -
Gso7g1708 1780 SMART testlast3 555 614 IPR018501 -
Gso7g1708 1780 CDD homeodomain 48 102 IPR001356 GO:0003677
Gso7g1708 1780 MobiDBLite consensus disorder prediction 1561 1585 - -
Gso7g1708 1780 Gene3D - 30 104 - -
Gso7g1708 1780 MobiDBLite consensus disorder prediction 840 859 - -
Gso7g1708 1780 MobiDBLite consensus disorder prediction 101 128 - -
Gso7g1708 1780 MobiDBLite consensus disorder prediction 836 877 - -
Gso7g1708 1780 MobiDBLite consensus disorder prediction 1545 1560 - -
Gso7g1708 1780 MobiDBLite consensus disorder prediction 1722 1753 - -
Gso7g1708 1780 SMART HOX_1 45 107 IPR001356 GO:0003677
Gso7g1708 1780 MobiDBLite consensus disorder prediction 387 441 - -
Gso7g1708 1780 MobiDBLite consensus disorder prediction 22 52 - -
Gso7g1708 1780 ProSiteProfiles HARE-type HTH domain profile. 737 806 IPR007759 GO:0006355
Gso7g1708 1780 Pfam DDT domain 557 611 IPR018501 -
Gso7g1708 1780 MobiDBLite consensus disorder prediction 1624 1639 - -
Gso7g1708 1780 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 16 1780 IPR044977 GO:0006357
Gso7g1708 1780 Coils Coil 402 482 - -
Gso7g1708 1780 SUPERFAMILY Homeodomain-like 33 102 IPR009057 -
Gso7g1708 1780 ProSiteProfiles 'Homeobox' domain profile. 43 103 IPR001356 GO:0003677
Gso7g1708 1780 MobiDBLite consensus disorder prediction 1234 1254 - -
Gso7g1708 1780 MobiDBLite consensus disorder prediction 1223 1254 - -
Gso7g1708 1780 Pfam Homeodomain 46 102 IPR001356 GO:0003677
Gso7g1708 1780 PANTHER HOMEOBOX DOMAIN PROTEIN 16 1780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1708 Gso-Chr7 39147223 39157472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1708 39 1706 Homeobox Transcription Factor Family AT1G28420 47.564 0.0 1300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gso7g1708 WSD 4.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1708 - - gmx:100818817 3200.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1708 7 39147223 39157472 Gso11g2622 11 42190678 42201076 PCT
Gso11g2622 11 42190678 42201076 Gso7g1708 7 39147223 39157472 PCT