LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso7g1692	ATGGGAAAATATGGTGTCTATATCCGACACCCTGGAAAGAAGATACTCGTGTGGCTTGGTAGCTTTGACTCTGCCATAGAAGTGGCCAAAGCCTATGATGCCGCCGCCATCAAGTTTTGTGGCTTTGACAAGGCCAAAACCAACTTTTCGATCCCCCAAAACCACAACAACAATGTGGTGATTCAAACCCCCACCACCATGGATTCCTTAACAACAAACTTCACAAGTCATAACCAAGAAGCTGCTAAAGCCTATGACGCTGCCGCCATCAAGTTTTGTGACCCTGACAAGGCCAGAACCAACTTTCCTATCCCCAAAATTCACAAAAACAATATGGTGATTCAAACCCCAACCACCATCAATTCCTCAACAACCACAACAAACCCTTCCTCATCCATGTCATTGCCCATCCATGTCAATTGCTCGACTAGTCATAACCAAGGTCACTCTGGATGTAGTTCCTCCTCAACATTCATTGTTGTCGAGGCTGGAAAAAAGCTTGATGTGGATCTTAACTACCCTCCTCCCCCAAGAAATCCCTTGAATCGAGAACAATGTTAA	561	0.451	MGKYGVYIRHPGKKILVWLGSFDSAIEVAKAYDAAAIKFCGFDKAKTNFSIPQNHNNNVVIQTPTTMDSLTTNFTSHNQEAAKAYDAAAIKFCDPDKARTNFPIPKIHKNNMVIQTPTTINSSTTTTNPSSSMSLPIHVNCSTSHNQGHSGCSSSSTFIVVEAGKKLDVDLNYPPPPRNPLNREQC*	187

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso7g1692	186	SUPERFAMILY	DNA-binding domain	2	50	IPR016177	GO:0003677
	Gso7g1692	186	Gene3D	AP2/ERF domain	1	51	IPR036955	GO:0003700\|GO:0006355
	Gso7g1692	186	Gene3D	AP2/ERF domain	69	104	IPR036955	GO:0003700\|GO:0006355
	Gso7g1692	186	PANTHER	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	2	68	-	-
	Gso7g1692	186	PANTHER	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	79	161	-	-
	Gso7g1692	186	SMART	rav1_2	2	56	IPR001471	GO:0003700\|GO:0006355
	Gso7g1692	186	PANTHER	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF117	2	68	-	-
	Gso7g1692	186	PANTHER	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF117	79	161	-	-
	Gso7g1692	186	CDD	AP2	2	49	IPR001471	GO:0003700\|GO:0006355
	Gso7g1692	186	ProSiteProfiles	AP2/ERF domain profile.	1	50	IPR001471	GO:0003700\|GO:0006355

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso7g1692	Gso-Chr7	39013304	39014017	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso7g1692	2	98	AP2-EREBP Transcription Factor Family	AT5G44210	38.532	1.89e-16	72.0

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso7g1692	K09286		-	nnu:104608167	72.0182

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