Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1692 ATGGGAAAATATGGTGTCTATATCCGACACCCTGGAAAGAAGATACTCGTGTGGCTTGGTAGCTTTGACTCTGCCATAGAAGTGGCCAAAGCCTATGATGCCGCCGCCATCAAGTTTTGTGGCTTTGACAAGGCCAAAACCAACTTTTCGATCCCCCAAAACCACAACAACAATGTGGTGATTCAAACCCCCACCACCATGGATTCCTTAACAACAAACTTCACAAGTCATAACCAAGAAGCTGCTAAAGCCTATGACGCTGCCGCCATCAAGTTTTGTGACCCTGACAAGGCCAGAACCAACTTTCCTATCCCCAAAATTCACAAAAACAATATGGTGATTCAAACCCCAACCACCATCAATTCCTCAACAACCACAACAAACCCTTCCTCATCCATGTCATTGCCCATCCATGTCAATTGCTCGACTAGTCATAACCAAGGTCACTCTGGATGTAGTTCCTCCTCAACATTCATTGTTGTCGAGGCTGGAAAAAAGCTTGATGTGGATCTTAACTACCCTCCTCCCCCAAGAAATCCCTTGAATCGAGAACAATGTTAA 561 0.451 MGKYGVYIRHPGKKILVWLGSFDSAIEVAKAYDAAAIKFCGFDKAKTNFSIPQNHNNNVVIQTPTTMDSLTTNFTSHNQEAAKAYDAAAIKFCDPDKARTNFPIPKIHKNNMVIQTPTTINSSTTTTNPSSSMSLPIHVNCSTSHNQGHSGCSSSSTFIVVEAGKKLDVDLNYPPPPRNPLNREQC* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1692 186 SUPERFAMILY DNA-binding domain 2 50 IPR016177 GO:0003677
Gso7g1692 186 Gene3D AP2/ERF domain 1 51 IPR036955 GO:0003700|GO:0006355
Gso7g1692 186 Gene3D AP2/ERF domain 69 104 IPR036955 GO:0003700|GO:0006355
Gso7g1692 186 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 68 - -
Gso7g1692 186 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 79 161 - -
Gso7g1692 186 SMART rav1_2 2 56 IPR001471 GO:0003700|GO:0006355
Gso7g1692 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF117 2 68 - -
Gso7g1692 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF117 79 161 - -
Gso7g1692 186 CDD AP2 2 49 IPR001471 GO:0003700|GO:0006355
Gso7g1692 186 ProSiteProfiles AP2/ERF domain profile. 1 50 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1692 Gso-Chr7 39013304 39014017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1692 2 98 AP2-EREBP Transcription Factor Family AT5G44210 38.532 1.89e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1692 K09286 - nnu:104608167 72.0182