Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1688 ATGGCGGAGATTTCAAGTTCAGGGTACAAGGAATATGCGGCTGGCTTGTTCGCTGGTGTTGCCGCTGTAGCCACTGGCCACCCCTTTGACACCGTCAAGGTGATGCTGCAAAAGCACAATGCAGAAGCACATAAGATTCAGTATAAAAATGGATGGCATTGCACTGCTAGGATATTGAAGACTGAAGGAATCAAAGGGCTTTATAGAGGAGCAACATCATCTTTTGTTGGGATGGCAGTTGAAGGATCACTCTTTTTTGGCATTTATTCCCAGACAAAAGTTTACCTTCAGGGGGGAGTTCAAAGTGGGGAACCAAGGCCTCAAGTGATAATACCATCTGCAGCTTATAGTGGTGCCATCATCAGTTTTGTGTTAGGTCCAACAGAGCTGATAAAGTGTAGGATGCAGATACAAGGCACTGACTCTTTGGTTCCTAAATCCAGTAGATACAATAGTCCCCTTGATTGTGCCCTTAAAACTGTAAAAACTGAAGGGGTGAAAGGAATTTTTCGTGGAGGTTGTGCAACATTGCTTAGAGAATCTATAGGGAATGCTGTCTTTTTCAGTGTATACGAATATGTGCGTTATTACATGCATTCAAATATCAAAGCTGCTTCATCCGATTACACCAACCTAGTTGATATTGGAATTGGGATCGTTAGTGGTGGCCTTGGTGGTGTGGCTTTTTGGTTGACAGTTTTGCCTCTTGATGTGGCAAAGACTTTAATTCAGACAAACCCTGATAAAAATTGTCCAAGAAATCCTTTTCGGGTCTTGAGTTCAATCTATCAAAGGGCTGGATTCAAGGGATGTTATACAGGTTTGGGTCCTACTGTAAGTCGAGCATTTCCTGCTAATGCTGCAACAATTGTCGCATGGGAGCTAGCATTGAAAATGCTAGGCATTAAGCATGACTGA 918 0.4292 MAEISSSGYKEYAAGLFAGVAAVATGHPFDTVKVMLQKHNAEAHKIQYKNGWHCTARILKTEGIKGLYRGATSSFVGMAVEGSLFFGIYSQTKVYLQGGVQSGEPRPQVIIPSAAYSGAIISFVLGPTELIKCRMQIQGTDSLVPKSSRYNSPLDCALKTVKTEGVKGIFRGGCATLLRESIGNAVFFSVYEYVRYYMHSNIKAASSDYTNLVDIGIGIVSGGLGGVAFWLTVLPLDVAKTLIQTNPDKNCPRNPFRVLSSIYQRAGFKGCYTGLGPTVSRAFPANAATIVAWELALKMLGIKHD* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1688 305 Gene3D Mitochondrial carrier domain 11 304 IPR023395 -
Gso7g1688 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Gso7g1688 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Gso7g1688 305 SUPERFAMILY Mitochondrial carrier 9 294 IPR023395 -
Gso7g1688 305 Pfam Mitochondrial carrier protein 113 198 IPR018108 -
Gso7g1688 305 Pfam Mitochondrial carrier protein 219 300 IPR018108 -
Gso7g1688 305 Pfam Mitochondrial carrier protein 9 97 IPR018108 -
Gso7g1688 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Gso7g1688 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 5 132 - -
Gso7g1688 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 132 304 - -
Gso7g1688 305 PANTHER - 5 132 - -
Gso7g1688 305 PANTHER - 132 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1688 Gso-Chr7 38953331 38958094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1688 25 300 Antiporters AT1G79900 29.433 1.58e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1688 K15109 - gmx:100815087 602.053