LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso7g1673	ATGGATGAAGATAGCAGTAATTCTTGGATAAGGAGGGCCAAATTCTCCCACACAGTGTGTCACAGGTTGAACTATTCCAGTTCTGGATTTGGCTCTTTCAGCATTCAGCCAAGGGCACAGCACAGTTCTAGTCTGAAATCAAGGCCTGAAGTGGCTTTTGCCTCCAAGGCTTCTTCACAGGCTCAGAAGAAACCAATAATGAACAAGCAGAGATCTTTGTCCCCTTTGCCTCAAACCTCTCTCTCTGAGACCTTCAAGGAAGCCAGACATGAGCAGAAGAGGTTCTCAACACCTGGTCCAAGGAGGAAAGAGCAGGACAAGGACAAGAGAATCATGGGGAAGTTGCTCAACAAGGATTCTCATGTGTTCAATTCCAAATCCAATCACAGCAGTCCAATTACTACTAAATCCCCTTACAGCAGTCCAATTAGGCACCTTGCTTCGATGAAATTAAGTGACAAGTCGAAGCAGCACCGCAAGGATTTGGGATGGACAAAGTACTTTGACCATGGAGGGGGAAAGGTTACTGCTGTGGAAACAGCTGAGGAATGGAATGTTGACCTCTCCAAGCTCTTTGTTGGTGTTAGGTTTGCCCATGGTGCTCACAGCAGGCTTTACCATGGCATGTATAAGGATGAAGCTGTTGCTGTGAAAATTATCACGGTACCGGATGATGACGAAAACGGAATGTTGGCGGATCGATTAGAGAAACAATTCATTAGAGAAGTCTCGCTTTTATCGCGCCTCCACCACCAAAATGTTATAAAGTTCGTAGCAGCATGCAGAAAGCCACCTGTTTATTGTGTTATCACAGAATATCTATCAGAAGGTTCCTTGAGGTCATATTTGCATAAGTTGGAAAGAAAAACTATTCCTCTAGAGAAGCTAATTGCTTTTGCTCTGGACATTGCTCGTGGAATGGAGTATATACACTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAACGTCCTTATTAAAGAAGACTTTCACCTTAAAATTGCTGACTTTGGCATTGCTTGTGAGGAAGCGTACTGTGACTTATTTGCTGATGACCCTGGTACCTACCGCTGGATGGCACCTGAGATGATCAAACGAAAATCCTATGGGAGAAAGGTTGATGTATATAGTTTTGGACTTATCTTATGGGAAATGGTGACTGGAACTATACCATATGAGGACATGACTCCCATCCAGGCTGCTTTTGCCGTAGTAAATAAGAATGTAAGGCCAGTTATTCCTTCAAACTGTCCACCTGCAATGCGAGCTTTAATCGAGCAATGTTGGTCTTTGCATCCGGACAAGAGGCCCGAGTTCTGGCAGGTTGTTAAGGTATTAGAACAATTTGAGTCTTCGCTTGCTCATGATGGAACTCTGACTCTGGTGGAAAATCCTTGTTGCCCTGATCATAAGAAAGGGCTTCTCCATTGGATTCAAAAGCTTGGTCCTGTGCATCATAATAATGGCCCTGTGCCTAAACCGAAATTTACATGA	1497	0.4402	MDEDSSNSWIRRAKFSHTVCHRLNYSSSGFGSFSIQPRAQHSSSLKSRPEVAFASKASSQAQKKPIMNKQRSLSPLPQTSLSETFKEARHEQKRFSTPGPRRKEQDKDKRIMGKLLNKDSHVFNSKSNHSSPITTKSPYSSPIRHLASMKLSDKSKQHRKDLGWTKYFDHGGGKVTAVETAEEWNVDLSKLFVGVRFAHGAHSRLYHGMYKDEAVAVKIITVPDDDENGMLADRLEKQFIREVSLLSRLHHQNVIKFVAACRKPPVYCVITEYLSEGSLRSYLHKLERKTIPLEKLIAFALDIARGMEYIHSQGVIHRDLKPENVLIKEDFHLKIADFGIACEEAYCDLFADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNKNVRPVIPSNCPPAMRALIEQCWSLHPDKRPEFWQVVKVLEQFESSLAHDGTLTLVENPCCPDHKKGLLHWIQKLGPVHHNNGPVPKPKFT*	499

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso7g1673	498	PANTHER	TYROSINE KINASE FAMILY PROTEIN	4	474	-	-
	Gso7g1673	498	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	4	474	-	-
	Gso7g1673	498	Gene3D	Transferase(Phosphotransferase) domain 1	276	465	-	-
	Gso7g1673	498	MobiDBLite	consensus disorder prediction	120	141	-	-
	Gso7g1673	498	CDD	STKc_MAP3K-like	198	447	-	-
	Gso7g1673	498	MobiDBLite	consensus disorder prediction	84	116	-	-
	Gso7g1673	498	SMART	serkin_6	191	450	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso7g1673	498	ProSiteProfiles	Protein kinase domain profile.	191	451	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso7g1673	498	PRINTS	Tyrosine kinase catalytic domain signature	271	284	IPR001245	GO:0004672\|GO:0006468
	Gso7g1673	498	PRINTS	Tyrosine kinase catalytic domain signature	309	327	IPR001245	GO:0004672\|GO:0006468
	Gso7g1673	498	PRINTS	Tyrosine kinase catalytic domain signature	355	365	IPR001245	GO:0004672\|GO:0006468
	Gso7g1673	498	PRINTS	Tyrosine kinase catalytic domain signature	374	396	IPR001245	GO:0004672\|GO:0006468
	Gso7g1673	498	PRINTS	Tyrosine kinase catalytic domain signature	418	440	IPR001245	GO:0004672\|GO:0006468
	Gso7g1673	498	Gene3D	Phosphorylase Kinase; domain 1	179	275	-	-
	Gso7g1673	498	Pfam	Protein tyrosine and serine/threonine kinase	197	447	IPR001245	GO:0004672\|GO:0006468
	Gso7g1673	498	SUPERFAMILY	Protein kinase-like (PK-like)	178	447	IPR011009	-
	Gso7g1673	498	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	315	327	IPR008271	GO:0004672\|GO:0006468
	Gso7g1673	498	MobiDBLite	consensus disorder prediction	31	83	-	-
	Gso7g1673	498	MobiDBLite	consensus disorder prediction	31	141	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso7g1673	Gso-Chr7	38730604	38735107	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso7g1673	1	498	MAP Kinase Kinase Kinase	AT5G58950	57.885	0.0	608

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Gso7g1673		PK_Tyr_Ser-Thr	4.3e-63	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso7g1673	-		-	gmx:100784454	1019.22

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso7g1673	7	38730604	38735107	Gso15g0645	15	5741303	5744969	PCT
	Gso7g1673	7	38730604	38735107	Gso11g2651	11	42468977	42472620	PCT
	Gso15g0645	15	5741303	5744969	Gso7g1673	7	38730604	38735107	PCT
	Gso11g2651	11	42468977	42472620	Gso7g1673	7	38730604	38735107	PCT