Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1664 ATGCAAAGTCAACAAACAGTGAAAGAAGAAGATGATGAAGGTCCACCTCCGGGATGGCAACCTCTCCCCGCTCAGCCACCGCCACCGCCACGTCCATCCGGTTGGGCTCAAATGGTTTGCGGTTCTTGTCGTCGCCTGCTTTCATATCCACGAGGTGCCAAACATGTCAAATGTTCATGCTGTCAGACTGTCAACATTGTATTAGAAGCTGATCAGGTTGGGCAAGTTAAGTGTGGCAGTTGTGCGGTATTGCTGATGTACCCATATGGTGCTTCACAAGTTAGATGTTCATCATGCCGATTTGTGACAGAAATTGGGGCACACAACAAGCGGCCTCCATGGTCTGTACAACAAAGGAAGCCATCTCCTCCAAAAACTGGTTGTTAG 387 0.491 MQSQQTVKEEDDEGPPPGWQPLPAQPPPPPRPSGWAQMVCGSCRRLLSYPRGAKHVKCSCCQTVNIVLEADQVGQVKCGSCAVLLMYPYGASQVRCSSCRFVTEIGAHNKRPPWSVQQRKPSPPKTGC* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1664 128 MobiDBLite consensus disorder prediction 1 15 - -
Gso7g1664 128 MobiDBLite consensus disorder prediction 16 33 - -
Gso7g1664 128 PANTHER PROTEIN LSD1 25 124 IPR040319 -
Gso7g1664 128 PANTHER PROTEIN LOL2 25 124 - -
Gso7g1664 128 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 75 103 IPR005735 -
Gso7g1664 128 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 37 67 IPR005735 -
Gso7g1664 128 MobiDBLite consensus disorder prediction 1 33 - -
Gso7g1664 128 Pfam LSD1 zinc finger 78 102 IPR005735 -
Gso7g1664 128 Pfam LSD1 zinc finger 40 64 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Gso7g1664 zf-LSD1 2.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1664 - - gmx:100780865 244.588