Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1656 ATGTATGTAGCTTCCATGCGCAAGTCTTTCAAGGACTCCTTGAAAGTCCTTGAAGCTGATATCCAACACGCCAATACCCTGGCCTCAGATTTTCCAAGGGAGTATGATGGTGCATGCCTTCAGATGAGAATGTCATACAGTCCAGCTGCACACCTGTTCCTTTTCTTGGTACAGTGGACAGATTGCCATCTTGCTGGAGCCCTTGGACTGTTAAGAATCCTAATTTACAAGGTCTATGTGGATGGGACAACCACCATGTCTACACATGAACGAAAAGCAAGTATTAGAGAATTCTATGCGGTCATTTATCCCTCTTTGTTGCAACTTGAAAAAGGTGTAACTGATACTGAGGATAAGAAGCAAAAGGCTGTGTGCATGGAGAGGTACCGTAGAAGAGATGATGAGGAGTATAGGCAGTCTTCTGACATAGACATTGAAAGAGAAGATGAATGTGGAATATGCATGGACATGAATAGTAAGATTGTGCTTCCCAACTGCAATCATGCCATGTGCCTGAAATGTTACCGAGAATGGCGAACAATATCACAATCATGCCCATTTTGCCGCGACAGTCTGAAGAGAGTGAACTCAGGTGATCTCTGGGTATTCACCGATAGAAGGGATGTGGTAGACATGGCAACAGTGACAAGGGAGAATCTCAGAAGGCTTTTCATGTACATAGATAAGTTGCCTCTGATTGTTCCAGACTCCCTTTTTGACACATATGACTCTCACATAAGGTAA 744 0.4355 MYVASMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDTEDKKQKAVCMERYRRRDDEEYRQSSDIDIEREDECGICMDMNSKIVLPNCNHAMCLKCYREWRTISQSCPFCRDSLKRVNSGDLWVFTDRRDVVDMATVTRENLRRLFMYIDKLPLIVPDSLFDTYDSHIR* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1656 247 SUPERFAMILY RING/U-box 139 193 - -
Gso7g1656 247 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF8-LIKE 4 247 - -
Gso7g1656 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 197 IPR013083 -
Gso7g1656 247 ProSiteProfiles Zinc finger RING-type profile. 151 189 IPR001841 -
Gso7g1656 247 SMART ring_2 151 188 IPR001841 -
Gso7g1656 247 PANTHER RING FINGER PROTEIN 41, 151 4 247 - -
Gso7g1656 247 Pfam Zinc finger, C3HC4 type (RING finger) 148 194 - -
Gso7g1656 247 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1656 Gso-Chr7 38571056 38574965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1656 K25840 - gmx:100777318 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1656 7 38571056 38574965 Gso15g0625 15 5568875 5572449 PCT
Gso7g1656 7 38571056 38574965 Gso11g2671 11 42655367 42659269 PCT
Gso15g0625 15 5568875 5572449 Gso7g1656 7 38571056 38574965 PCT
Gso11g2671 11 42655367 42659269 Gso7g1656 7 38571056 38574965 PCT