Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1642 ATGGCATACCGACGGTGCCTCTTGATAAGAGGGAACCTCGTGGATCGGAGGTGCCATCCGTCTTTCAGTTATGTTCTCCACAGTGACCAGGGGAAGCACGAAAACACCAATGAAAAATCATCTTCAGGAGGGGATGGTGATTTTACCCAAACAAGGTCCTTTGGAAGCTCTCTTAATGGACCAATGGGTTTTTTTGCACATTCCCGTGATAGATTTCTTTCTCCGTGCTCCAGATATGGTTTCTGCCGATATATGTCGACGGTGAATCAGGGTTCGGATAAGATTAGTAGTGACGTAATGACTGATGTGGCTGATGTCCTCACCAACACAACCATGGATGCTGTAGTTTCTCAGGCTCCCGTTGTCAATGAGGTTGCTATTGCTGCTGCTGATTCTTTTTTGCCTGTACAGGCCTTGCAGTACGTTATAGATGCTGTGCATTCCTACACTGGCTTAAATTGGTGGGCAGCCATAGTTCTAACAACCCTGTTGATTCGAACCGCTACAGTTCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAACTTACGTTAATGAGGCCTCATTTGGAAGAGATAAAGCAACAAATGGAGGGACTGACTATGGATCCCGTAGCTGTTGCTAAAGGTCAGCAGCAGATGAAGAAACTATTTAAGGAATATGGTGTGAGTCCTTTTACGCCATTGAAGGGACTCTTTATCCAAGGGCCTATTTTTGTTAGTTTTTTTCTTGCGATAACAAATATGGCTGAAAAAGTGCCATCATTCAAGCATGGCGGAGCTTCTTGGTTTATTGATCTCTCAACTCCTGATGCCTTGTACATTTTTCCAGCTTTGACAGCATTGTCATTCTTAATAACAGTAGAGTGTAATATGCAAGAAGGGATGGAAGGAAATCCTGTGGCTGGCACCATGAAAAATGTCTCTAGGGGTCTTGCTGTTCTTACAGTTCCTTTCACCATGGGATTTCCAAAGGCAATATTCTGTTACTGGGTTACATCAAATTTGTTTTCACTTGTGTATGGACTTGTGCTTAAAGTTCCTGGTGTAAAGAAAACTTTGGGTATTCCTGAAATACCTGTTGCACCACCCACCACCACCAGTGCTCCTCAATCTCCCTTTTCTATATTTCCAGCTCTAAAACAAGCTACATCATCAACAACAAATGGGCAAAGCTCAATTCCAGAAGAAGCTTCAAAACATTCAAATAAAAAAATATCTTCTTCTTCTGTTATTAGTCAAAGGCTTAGAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAGAACCAGAAGTGA 1296 0.4205 MAYRRCLLIRGNLVDRRCHPSFSYVLHSDQGKHENTNEKSSSGGDGDFTQTRSFGSSLNGPMGFFAHSRDRFLSPCSRYGFCRYMSTVNQGSDKISSDVMTDVADVLTNTTMDAVVSQAPVVNEVAIAAADSFLPVQALQYVIDAVHSYTGLNWWAAIVLTTLLIRTATVPLLINQLKATSKLTLMRPHLEEIKQQMEGLTMDPVAVAKGQQQMKKLFKEYGVSPFTPLKGLFIQGPIFVSFFLAITNMAEKVPSFKHGGASWFIDLSTPDALYIFPALTALSFLITVECNMQEGMEGNPVAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLVYGLVLKVPGVKKTLGIPEIPVAPPTTTSAPQSPFSIFPALKQATSSTTNGQSSIPEEASKHSNKKISSSSVISQRLRSLEKQVKGRKKNQK* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1642 431 MobiDBLite consensus disorder prediction 382 397 - -
Gso7g1642 431 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 153 343 IPR028055 -
Gso7g1642 431 Pfam 60Kd inner membrane protein 154 343 IPR001708 GO:0016021|GO:0032977
Gso7g1642 431 MobiDBLite consensus disorder prediction 382 431 - -
Gso7g1642 431 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 74 405 - -
Gso7g1642 431 MobiDBLite consensus disorder prediction 29 50 - -
Gso7g1642 431 PANTHER OXA1 74 405 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1642 Gso-Chr7 38403342 38410290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1642 157 352 Chloroplast and Mitochondria Gene Families AT2G28800 24.880 3.65e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1642 K03217 - gmx:100817052 822.387