Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1635 ATGGATAGCAGAGATTCATCATCGGGGTCTCAGCACCCACACCTTCCTCCAGGGTTTCGGTTCCACCCCACCGATGAAGAGCTCGTGGTTCACTACCTCAAGAGAAAAGCTGCTTCTGCACCCCTTCCCGTCGCCATCATCGCCGATGTTGATCTCTACAAGTTCGACCCTTGGGAGCTCCCAAGTAAAGCAACTTTTGGTGAGCAAGAGTGGTACTTTTTCAGCCCAAGGGATAGAAAATACCCAAATGGGGCTAGGCCCAATAGAGCTGCTACTTCTGGGTATTGGAAGGCCACTGGAACTGACAAGCCTATATTAACAACATATGGGCACCACAAAGTTGGAGTTAAGAAAGCACTTGTTTTTTATGGTGGAAAGCCTCCAAAAGGGGTTAAAACCAATTGGATCATGCATGAGTATAGGCTTGTTGATGATTCCTTTAATTCAAGCTCAAAACCGCCTCCTCTGGTTCCTCATAACAAGAAAAATTCCCTGAGGCTGGACGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAACACCACCCTACCAAGGCCACCCATGATGGAGCATGAAGAGGAGCTTTCAATGGACAACATGCTACCAACGATGTCAACGTTGTCAATGGCTAACAACAAAATGCAAAACCCTAAACCTCCCTCGAGGAGCACGAGTTATGGTCCACTAGGACTTGAAAATGATGACAACTTCTTCGAGGGAGTCTTGGCCGTGGATCAAAGCATGCAAAATGGTTCTGATTCTCACATTTTCTCTCCAAACTCAAAGGGTGATAATAATAATAACAACAACAATAATGCTAGCAACTTTCCTATCAAACGTGCACTGATCACATCACAACTTTGGAACGAGACAGGGTCTCCGGGGTCTTCTTCTTCGTGCAAGCGATTTCATGGTGATCTTAATTGTGGATGCAGCAATGCTGAGGACAATAATGATTCCTTTATTTCCCTGCTAAGCCAGTTTCCTCAGAACGCAACTTTTCAGCCAAACGCGATTCATGGGTCCGTTGAGGATGATGGTGCGCCGAGGCAACAATTTCATCTTCATGGCATAAATTGGAACTGA 1089 0.4564 MDSRDSSSGSQHPHLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIADVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTTYGHHKVGVKKALVFYGGKPPKGVKTNWIMHEYRLVDDSFNSSSKPPPLVPHNKKNSLRLDDWVLCRIYKKSNNTTLPRPPMMEHEEELSMDNMLPTMSTLSMANNKMQNPKPPSRSTSYGPLGLENDDNFFEGVLAVDQSMQNGSDSHIFSPNSKGDNNNNNNNNASNFPIKRALITSQLWNETGSPGSSSSCKRFHGDLNCGCSNAEDNNDSFISLLSQFPQNATFQPNAIHGSVEDDGAPRQQFHLHGINWN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1635 362 PANTHER NAC TRANSCRIPTION FACTOR 56 1 336 - -
Gso7g1635 362 MobiDBLite consensus disorder prediction 1 21 - -
Gso7g1635 362 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Gso7g1635 362 MobiDBLite consensus disorder prediction 251 276 - -
Gso7g1635 362 ProSiteProfiles NAC domain profile. 15 178 IPR003441 GO:0003677|GO:0006355
Gso7g1635 362 SUPERFAMILY NAC domain 10 178 IPR036093 GO:0003677|GO:0006355
Gso7g1635 362 Gene3D NAC domain 24 183 IPR036093 GO:0003677|GO:0006355
Gso7g1635 362 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1635 Gso-Chr7 38283312 38285836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1635 5 362 NAC Transcription Factor Family AT1G61110 50.829 2.85e-107 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso7g1635 NAM 2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1635 - - gmx:100797132 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1635 7 38283312 38285836 Gso15g0607 15 5393811 5395658 PCT
Gso7g1635 7 38283312 38285836 Gso11g2993 11 45775995 45778347 PCT
Gso15g0607 15 5393811 5395658 Gso7g1635 7 38283312 38285836 PCT
Gso11g2993 11 45775995 45778347 Gso7g1635 7 38283312 38285836 PCT