Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1634 ATGGATAACATTGTATTAAAGATGACTAGTTTATACACCTTGGTTCTTTTACTTTTACTTTTTCTATCTTATAGGCCTGCTCTTTCATTTTCTTCTAGACATAGGCAATATTGGGGTGGTGGGAGGATATTGAGCTCTGGTGATCATAATGGTGATCTTGTGACTAATTTGCCTGGCCAGCCTGGGGTGAATTTCCAGCACTATGCTGGATATGTCACAGTCAATGAAACCAATGGAAGAGCACTCTTTTACTGGTTCTATGAGGCTATCACCAAGCCAGAAGAGAAACCATTGGTGCTTTGGCTTAATGGAGGCCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGTCCATTTTTAGTGGACACTGATGGCCAAGGCCTCAAATTTAATAACTTCTCTTGGAACAGAGAAGCCAACATGTTATTCTTGGAATCTCCTGTTGGAGTGGGCTTTTCATACTCAAATACAAGCAGTGACTATGACCAATTGGGAGATGAATTGACAGCTAATGATGCTTACTCTTTTCTTCACAATTGGTTCCAAAAGTTTCCATCCTATAGAATTAGGACATTTTACATAGCAGGGGAGAGCTATGCAGGAAAATATGTACCAGAGCTGGCTGAACTCATCCATGATAGGAACAAGGACCCCTCCCTCTATATTGATCTCAAGGGTATTCTGTTGGGTAATCCTGAAACATCTGATGCTGAGGACTGGATGGGTCTGGTTGATTATGCTTGGAGCCATGCTGTGATATCTGATGAAACTCATCAAACAATCAAAACAAGTTGTGACTTTAACAGCACTGATCCATGGCGAAATAAAGATTGTAGCCAAGCTGTGGATGAAGTTCTCAAACAATACAATGAAATTGATATCTATAGTCTCTACACCTCTGTTTGCTTTGCCAGTACAGCAAGCTCAGACGATCAATCCATGCAAACTTCCATGAAGCGTTCATCTAAAATGATGCCTAGGATGTTGGGTGGCTATGATCCGTGCCTTGATGGCTATGCTAAAGCCTTTTATAATAAACCAGATGTTCAGAAGGCTCTTCATGCCAGCGATGGTCACAATCTAAAGAAATGGAGCATTTGCAATGACAAGATATTCAATGACTGGGCCGATTCAAAGCCATCTGTTATCCCAATTTACAAGAAGCTTATTTCAGCAGGACTTAGGATTTGGGTTTATAGTGGAGATACAGATGGTAGAGTACCAGTGCTGTCGACAAGGTACAGCTTAAGCCCTCTTGCGTTGCCTATCACTAAATCATGGAGGCCCTGGTACCATGACAATGAGGTTAGCGGGTGGTTTGAAGAATATGAGGGGCTTACATTTGCAACGTTTCGAGGAGCTGGCCATGCAGTTCCCTGTTTTAAACCAAGCAACTCACTTGCGTTCTTCTCCTCCTTTCTCAATGGAGAATCACCACCTTCTACAAAATAA 1461 0.4223 MDNIVLKMTSLYTLVLLLLLFLSYRPALSFSSRHRQYWGGGRILSSGDHNGDLVTNLPGQPGVNFQHYAGYVTVNETNGRALFYWFYEAITKPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGQGLKFNNFSWNREANMLFLESPVGVGFSYSNTSSDYDQLGDELTANDAYSFLHNWFQKFPSYRIRTFYIAGESYAGKYVPELAELIHDRNKDPSLYIDLKGILLGNPETSDAEDWMGLVDYAWSHAVISDETHQTIKTSCDFNSTDPWRNKDCSQAVDEVLKQYNEIDIYSLYTSVCFASTASSDDQSMQTSMKRSSKMMPRMLGGYDPCLDGYAKAFYNKPDVQKALHASDGHNLKKWSICNDKIFNDWADSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSPLALPITKSWRPWYHDNEVSGWFEEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLNGESPPSTK* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1634 486 Gene3D alpha/beta hydrolase 49 307 IPR029058 -
Gso7g1634 486 Gene3D - 338 374 - -
Gso7g1634 486 Gene3D - 385 479 - -
Gso7g1634 486 SUPERFAMILY alpha/beta-Hydrolases 50 480 IPR029058 -
Gso7g1634 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 146 IPR001563 GO:0004185|GO:0006508
Gso7g1634 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 157 IPR001563 GO:0004185|GO:0006508
Gso7g1634 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Gso7g1634 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Gso7g1634 486 PANTHER CARBOXYPEPTIDASE 11 483 - -
Gso7g1634 486 Pfam Serine carboxypeptidase 59 479 IPR001563 GO:0004185|GO:0006508
Gso7g1634 486 ProSitePatterns Serine carboxypeptidases, serine active site. 197 204 IPR018202 GO:0004185
Gso7g1634 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 483 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1634 Gso-Chr7 38251938 38258704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1634 341 480 Calmodulin-binding Proteins AT2G22960 35.461 1.47e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1634 K16297 - gmx:100815993 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1634 7 38251938 38258704 Gso15g0606 15 5381251 5386429 PCT
Gso7g1634 7 38251938 38258704 Gso11g2692 11 42875095 42879728 PCT
Gso15g0606 15 5381251 5386429 Gso7g1634 7 38251938 38258704 PCT
Gso11g2692 11 42875095 42879728 Gso7g1634 7 38251938 38258704 PCT