Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1630 ATGGGTTGTGCGAATTCGGAGTTGAATTTGCAAATTTTCATCTTGTCAATGTTGATTTTCACTGCAAGTTTGTGTGTTGGGGACACTGACCCACTTGATGTTGCGGCAATCAATAGTTTGTATGTGGCTCTTGGCTCACCACCCCTTGAGGGGTGGAAAGCCATAGGAGGAGATCCTTGTTTGGAACAATGGGAAGGTGTGAGTTGTGTCTTCTCCAACATAACTGCATTACGGCTGGGAGGCATGAATTTAAGCGGACAGCTGGGGAGTAATTTGGATTTCCCATCCATCATAGACATGGATCTTAGCAACAACCAGATTGGAGGGACCATTCCATCCACTTTGTCCCCTACTTTGAGGAACTTGTCACTGTCAGCTAATCATTTAAATGGAAGCATTCCAGATGCTTTGTCCTCGTTAACTCAATTGTCAGACTTGTCATTAAAAGATAACCATCTGAATGGGCAAATCCCAAATGTGTTTCTACAGCTCACTGGTTTGATGAATATGGATCTGTCTGGCAACAATTTGAGTGGTCAGCTGCCTCCCTCAATGGGGAATTTGTCATCTCTTATCATATTACACTTGCAGAACAATCAACTTTCTGGGATCCTTTTTGTTTTGCAGGACCTCCCTCTTCAGGATCTGAATATAGAGAACAATATATTCTCTGGGCCAATTCCCCCAGAGTTGTTGAGTATCCCTAATTTCAGAAAAGATGGGAATCCATTTAATACTACTATCATTCCATCACCTCCAGCTGCTTCCCCTGAACCTGCTGCTATGGCTCCTTCCCCAGAAAAATCACCTTGGAAAGTGACACATAATCCCTCTGATACCATAAAAGCACCAATACCTGCAATTGCTGGGAGATCTTTCAAAACTACAAAATTAGTTTGGATTGTTGGTGCAGGCTTTTTGATATTTATTGCATTAGGAGTCTGTCTTCTAATGCTGTGGTGCTTTAAGAGAAGACAGGAGAACAAGAAATATAAGAAACACAACACGAATGTGTATACAAGATCTTTGCATAAACGTACAAGCAGCGACTCCCCTTTTGAAGCAACTACTGACAAGGAGAAAGGATGGAGTTCCAAACTTCCACCCCTGCAGCCAGCACCACCACATCATATCCCAATCATTCCAGGAGAGAATTTAATAATAAATCAAGCTATATCTACCACAGCAACCAAAAGACAAATTGTAACAAATTCCATCAAAGTTTATACTGTTGCATCACTTCAGCAGTACACAAATAGTTTTTCCCAAGAAAATTATATAGGGGAAGGCATGCTTGGCCCTGTTTACAGAGCTGAACTCCCTGATGGAAAGTTACTGGCAGTTAGGAAGCTGAATGCTACTGCTTCTATGGGGCAAAATCATGAACAGTTTCTTCAATTAGCTTTCAGTATCTCCAAAATTCAACATGCTAATATTGTAAAGCTTATGGGCTACTGTGCTGAGTATAGTCAACGACTACTTGTACATGAGTATTGCAGTAATGGTACCCTACATGATGCATTGCATACTGATGATAAACTTCAGATTAAACTTTCATGGGATAATCGCATTTGGGTGTCACTTGGAGCGGCAAGAGCTTTAGAGTATTTGCATGAGCACTGTCAGCCACCTATTGTGCACCAAAACTTTAGGTCTGCTAATGTACTCCTCAATGACAATTTGGAAGTGCGTGTCTCTGATTGTGGATTAGGTTCTTTACTATCTTCAGGCTCTGCTAGTCAGTTGGTGGGATGCCACCTCACAGCTAATGGTTACAGTGCTCCTGAATTTGAGTATGGAAGTTATACACTGCAAAGTGATGTCTTTAGCTTTGGAGTCGTAATGCTAGAACTCCTCACTGGACGAAAATCCTATGACAGCTCACTGCCTCGTGGAGAACAATTTTTGGTGAGATGGGCAGTCCCTCAACTCCATGACATAGATGCATTGTCAAAAATGGTTGACCCCTCCTTGAATGGAGAATATCCTAAGAAATCATTGTCACGTTTTGCAGACATTATTTCTTCATGTATACAGCATGAACCTGAATTTCGACCAGTGATGTCAGAAATTGTTCAGGACCTCTTGCGAATGATGTAG 2100 0.4167 MGCANSELNLQIFILSMLIFTASLCVGDTDPLDVAAINSLYVALGSPPLEGWKAIGGDPCLEQWEGVSCVFSNITALRLGGMNLSGQLGSNLDFPSIIDMDLSNNQIGGTIPSTLSPTLRNLSLSANHLNGSIPDALSSLTQLSDLSLKDNHLNGQIPNVFLQLTGLMNMDLSGNNLSGQLPPSMGNLSSLIILHLQNNQLSGILFVLQDLPLQDLNIENNIFSGPIPPELLSIPNFRKDGNPFNTTIIPSPPAASPEPAAMAPSPEKSPWKVTHNPSDTIKAPIPAIAGRSFKTTKLVWIVGAGFLIFIALGVCLLMLWCFKRRQENKKYKKHNTNVYTRSLHKRTSSDSPFEATTDKEKGWSSKLPPLQPAPPHHIPIIPGENLIINQAISTTATKRQIVTNSIKVYTVASLQQYTNSFSQENYIGEGMLGPVYRAELPDGKLLAVRKLNATASMGQNHEQFLQLAFSISKIQHANIVKLMGYCAEYSQRLLVHEYCSNGTLHDALHTDDKLQIKLSWDNRIWVSLGAARALEYLHEHCQPPIVHQNFRSANVLLNDNLEVRVSDCGLGSLLSSGSASQLVGCHLTANGYSAPEFEYGSYTLQSDVFSFGVVMLELLTGRKSYDSSLPRGEQFLVRWAVPQLHDIDALSKMVDPSLNGEYPKKSLSRFADIISSCIQHEPEFRPVMSEIVQDLLRMM* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1630 699 ProSiteProfiles Protein kinase domain profile. 421 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1630 699 MobiDBLite consensus disorder prediction 253 274 - -
Gso7g1630 699 Gene3D Ribonuclease Inhibitor 34 251 IPR032675 -
Gso7g1630 699 MobiDBLite consensus disorder prediction 343 365 - -
Gso7g1630 699 SUPERFAMILY Protein kinase-like (PK-like) 402 695 IPR011009 -
Gso7g1630 699 PANTHER LEUCINE RICH REPEAT KINASE 2 7 340 - -
Gso7g1630 699 PANTHER LEUCINE RICH REPEAT KINASE 2 395 699 - -
Gso7g1630 699 MobiDBLite consensus disorder prediction 347 361 - -
Gso7g1630 699 Gene3D Transferase(Phosphotransferase) domain 1 499 699 - -
Gso7g1630 699 Pfam Protein tyrosine and serine/threonine kinase 424 695 IPR001245 GO:0004672|GO:0006468
Gso7g1630 699 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Gso7g1630 699 SUPERFAMILY L domain-like 34 236 - -
Gso7g1630 699 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 7 340 - -
Gso7g1630 699 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 395 699 - -
Gso7g1630 699 Gene3D Phosphorylase Kinase; domain 1 384 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1630 Gso-Chr7 38184602 38191143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1630 19 699 Strubbelig Receptor Gene Family AT4G03390 51.535 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso7g1630 PK_Tyr_Ser-Thr 2.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1630 - - gmx:100794130 1334.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1630 7 38184602 38191143 Gso15g0600 15 5310741 5318719 PCT
Gso7g1630 7 38184602 38191143 Gso11g2698 11 42933381 42941378 PCT
Gso15g0600 15 5310741 5318719 Gso7g1630 7 38184602 38191143 PCT
Gso11g2698 11 42933381 42941378 Gso7g1630 7 38184602 38191143 PCT