Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1628 ATGGTGACGTGGAGCACCTGGCAGGAGCTTCTCCTCGGTGGAGCGGTTTCCCGGCACGGAATCCGAGATTGGACCGTCATTGCCGCCGAACTCAAGACCCGAACCGTTTCACCATGCATTTTCACACCCGAGGTCTGTAAAGCCAAATATGTAGAGTTGCAACAGCAGTATCCTGGGGGTTGCACGTCTTGGTTTGAGGAGCTTAAGAAGAAAAGAGTGGCAGAGCTTAAGAAAGATTTGGAGCTATCCGAGGAAGTAATTGGGTCCCTTGAGTCAAAGCTTGAAACCCTTCAGGCTGGGAGGGATGAGAAAAGAGATGATTGCCATGTTGACAATGGCTCGGCTGAACCAGAGTTACATGTTCCTTCTCAGAAATTGGATAGAGTCGACACTTCTGCAAAAGAGATGTCAAAGGATGGGTTATCTGCTGGGAGTTTCACACATGAAACCAAGACAAACTGGACTCATGAATGCCAGGTTCCGGCAACATCTTGTGAATATGTGAGGACCAAGCCTGAAGTTTCAGCGTCTACTGAACAGGAGAAAGTTTTAAATGTAGATAAGTCAACTCACACTGTATATGAAGGACAGGGAGGGTGTTTGAAAAAACCGAGAGGGAAGAGAAAGAGGAAGGATTGTGGCAGAAGTATTAATGAAGTAAGTGCAAGAGAAAGTGATTTTTCAGCTGATGTGTGTAAAGAAAGTTCTATCAGCAACTGTGGTGAGATTGTCAAATCTTCTGGTATGAATGAGGAGAATGCAAACTTGAAGAAGGCTGGAATTAAAGATTTGATGGAGGTCTTAGATTCTTTTTTGACAGTTCAAGGTGCTTCTGCCTTCTCTTATAAGCATGATAGCCAGAAGCGAGGAAAATACGAGCAATTGATCCGGCAGCACATGGACTTTGAGACCATAAAGTCAAGAATCTGCAACGGAACAATCAAGTCCGTGGTGGAACTTTTAAGAGACTTGCTACTACTGAGCAACAATGCTCTAGCATTCTACTCCAAGAACACTCGGGAATACAAAACTGCTCTACAACTTAGAGACCTTGTCATCAAAACATTGACAGAGAAACTGGAGTGTGCTAGCACATCACCTGTGTGTGATCCTTCTGCAAAAGTCAGAAGCACGTGTTTCAGCACATCGCCTATGCGTGATTCTTCAGTGAAAGTCAGAAGCATTTGTTCCACTTCGCTTGTGCATGATCCTTCAGTGCAAGTCAGAAGCATGCGCCCTGGTAATCGCAAGATTGTTGCAAAGGTAGCTGGTGGCAGCTGCTCTGCTGAAAGGGTCTCAGTTGGAGTTAAGAAAGCTAAAAAAGTGGATTCTCTACCAGCTGAAAGGGTCTCGGCTGCAGTTAAGAAAGCTAACAAAGTCGAATCTCCACCTTCAGTGGAATCCGTCAAGAAAGCTTTTGGTGGTAGAGCAAAAAAGGTTGGACGTGAAAGTGCAGGTAAGAGAAATGCAACACCAAGGAATGAAAGGAAAAGAAGGAGAGCAAAGTGA 1509 0.4493 MVTWSTWQELLLGGAVSRHGIRDWTVIAAELKTRTVSPCIFTPEVCKAKYVELQQQYPGGCTSWFEELKKKRVAELKKDLELSEEVIGSLESKLETLQAGRDEKRDDCHVDNGSAEPELHVPSQKLDRVDTSAKEMSKDGLSAGSFTHETKTNWTHECQVPATSCEYVRTKPEVSASTEQEKVLNVDKSTHTVYEGQGGCLKKPRGKRKRKDCGRSINEVSARESDFSADVCKESSISNCGEIVKSSGMNEENANLKKAGIKDLMEVLDSFLTVQGASAFSYKHDSQKRGKYEQLIRQHMDFETIKSRICNGTIKSVVELLRDLLLLSNNALAFYSKNTREYKTALQLRDLVIKTLTEKLECASTSPVCDPSAKVRSTCFSTSPMRDSSVKVRSICSTSLVHDPSVQVRSMRPGNRKIVAKVAGGSCSAERVSVGVKKAKKVDSLPAERVSAAVKKANKVESPPSVESVKKAFGGRAKKVGRESAGKRNATPRNERKRRRAK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1628 502 Coils Coil 73 93 - -
Gso7g1628 502 Gene3D - 250 361 IPR036427 GO:0005515
Gso7g1628 502 MobiDBLite consensus disorder prediction 455 502 - -
Gso7g1628 502 MobiDBLite consensus disorder prediction 98 121 - -
Gso7g1628 502 MobiDBLite consensus disorder prediction 195 214 - -
Gso7g1628 502 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 1 502 - -
Gso7g1628 502 CDD SANT 3 53 IPR001005 -
Gso7g1628 502 ProSiteProfiles Bromodomain profile. 272 342 IPR001487 GO:0005515
Gso7g1628 502 Pfam Bromodomain 265 345 IPR001487 GO:0005515
Gso7g1628 502 SUPERFAMILY Bromodomain 260 362 IPR036427 GO:0005515
Gso7g1628 502 MobiDBLite consensus disorder prediction 98 114 - -
Gso7g1628 502 MobiDBLite consensus disorder prediction 472 491 - -
Gso7g1628 502 PANTHER BROMODOMAIN PROTEIN 1 502 - -
Gso7g1628 502 SMART bromo_6 257 361 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1628 Gso-Chr7 38148139 38153601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1628 - - gmx:100793085 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1628 7 38148139 38153601 Gso15g0598 15 5285652 5291153 PCT
Gso7g1628 7 38148139 38153601 Gso11g2700 11 42960662 42966132 PCT
Gso15g0598 15 5285652 5291153 Gso7g1628 7 38148139 38153601 PCT
Gso11g2700 11 42960662 42966132 Gso7g1628 7 38148139 38153601 PCT