Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1620 ATGCACGGAAGGGCGCGAGAGAAGCGCGGTTTGGATTCGGCTTCCGCTGAAGAAGGTCAGCCTGATCGGAAACGACCTGCGTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTTGACAGTCTGCAGAAACTTTGCTCGTCACTGGAGCCTATTCTACGCAGAGTTGTTAGTGAAGAAGTTGAGCGTGCTTTGGCAAAACTAGGCCCTGCCAAGCTTAATACTGGCAGGTCTTCCCCAAAGCGGATAGAAGGCCCCGATGGCAAAAATTTACAATTGCACTTCAAGACCAGGCTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGTGAGCAAGGGACAGCCATACATATTGTTTTGATTGATGCAAATTCTGGCCATATTGTCACATCAGGGCCAGAGTCATGTGTCAGGCTAGATGTTATTGTACTAGAGGGAGATTTCAATAATGAGGATGATGATAATTGGGACGAAGAAGAGTTTGATAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGACCTCTTCTAACTGGTGATCTGCAAGTCACACTGAAGGAGGGTGTAGGAACACTTGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTTAGATTGGGGCTGAAAGTTGCCTCAGGTTGTTGTGAGGAAATGCGTATCCGTGAAGCCAAATCAGAACCTTTCACAGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCGCCTGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGGTCATTTCACAAAAGGCTAAATAAAGCTGGAATATATATGGTTGAAGACTTCTTAAGACTTGTGGTCAGAGACCCTCAGAGATTGCGGAATATTCTTGGGAGTGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAGCACGCAAAGACTTGTGTTCTCAGTGGAAAACTTTACGTATACTATCCTGAAGATGCAAGAAATGTGGGTGTTGTTTTCAATAATATTTATGAATTAAGTGGCTTAATTGCCAACGACCAATATTACTCAGCTGATTCTCTCTCTGAGAATCAAAAGGTTTATGTAGACACATTGGTGAAGAAGGCATATGATAATTGGATGCATGTTATTGAGTATGATGGGAAGTCTCTGATAAATGACAACGAGGATAAGGCTTTGGATACCACTCATCCTCAGGCTCCAATGACTTCCCATGAATATTCAAACTCACTTCAGCAGATATCCATCCCAGCTTTGCCACTTCCAGTACATCCTGGCCAGCCTTCAATGGATTCAGGAGTAACAGTTGGAGGTTATCATGATGGGACAGCTTCTAGATTCTCCTTGCAACCACATCCTAATCTTAATTCTTCCATTCAGTTTGATGATAATGCATTTCCACTACAAAACCAGTTGATGAGTGCTTCACACCATGCCCAACTTCCAAGAAATGAAAATGGGCAGACTATTGGTCCTCCACAATCATCCACGCACGGCTTTGAGCCTGTAAGCATTTCAAATCCTACGTACAGAGGAGTTGAAGAGTACTTCCCAGAGGAGGAAATTCGTATTAGAAGTAATGAGATGCTAGAAAATGAAGATATGCAGCATCTACTCCGTATTTTTAACATGGGAGGCCAACCACATCCCACCTTTAATGCTCAGGATGATGGATACCCTAGTTCATCTACATACATTTCTGCAAACCCCATGGGCTACAATTTTGATGATGAACCAAACCGTTCCTCAGGCAAAGCTGTTGTGGGCTGGCTCAAGCTGAAGGCAGCTTTAAGATGGGGTATTTTTATTCGAAAGCAGGCTGCTGAGAGACGGGCACAACTTGTTGAATTGGATGACCCATAG 1872 0.4386 MHGRAREKRGLDSASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLNTGRSSPKRIEGPDGKNLQLHFKTRLSLPLFTGGKVEGEQGTAIHIVLIDANSGHIVTSGPESCVRLDVIVLEGDFNNEDDDNWDEEEFDSHIVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEEMRIREAKSEPFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYMVEDFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPEDARNVGVVFNNIYELSGLIANDQYYSADSLSENQKVYVDTLVKKAYDNWMHVIEYDGKSLINDNEDKALDTTHPQAPMTSHEYSNSLQQISIPALPLPVHPGQPSMDSGVTVGGYHDGTASRFSLQPHPNLNSSIQFDDNAFPLQNQLMSASHHAQLPRNENGQTIGPPQSSTHGFEPVSISNPTYRGVEEYFPEEEIRIRSNEMLENEDMQHLLRIFNMGGQPHPTFNAQDDGYPSSSTYISANPMGYNFDDEPNRSSGKAVVGWLKLKAALRWGIFIRKQAAERRAQLVELDDP* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1620 623 MobiDBLite consensus disorder prediction 1 24 - -
Gso7g1620 623 PANTHER OS02G0177800 PROTEIN 3 621 IPR012416 GO:0005516
Gso7g1620 623 MobiDBLite consensus disorder prediction 1 25 - -
Gso7g1620 623 Pfam Calmodulin binding protein C-terminal domain 320 382 IPR046829 -
Gso7g1620 623 Pfam Calmodulin binding protein-like N-terminal domain 90 237 IPR046831 -
Gso7g1620 623 PANTHER CALMODULIN-BINDING PROTEIN 3 621 - -
Gso7g1620 623 Pfam Calmodulin binding protein central domain 249 315 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1620 Gso-Chr7 38047333 38052604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1620 6 618 Calmodulin-binding Proteins AT5G57580 61.575 0.0 756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1620 7 38047333 38052604 Gso8g0492 8 4519397 4525131 GST
Gso7g1620 7 38047333 38052604 Gso15g0584 15 5157138 5162404 PCT
Gso15g0584 15 5157138 5162404 Gso7g1620 7 38047333 38052604 PCT