Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1606 ATGACGTCACACTCCCACTACCCACCCGACCTAGACGCCGACTCCGTCTCCTCCTCCCCACGCTCCGACCACTTCCACGACGCGCCGCCCCGTGTCCGCTTCATGTGCAGCTTCGGCGGCAAGATCCTCCCCCGCCCCCACGACAACCAGCTCCGCTACGTCGGCGGCGACACCCGCATCGTCGCCGTCTCCCGCTCTATCACTTTCTCCGCCCTTATTCTTAAACTCTCCAAACTCTCAGGCATGAGCAACATAACTGCCAAGTACCAGCTCCCGAACGAGGAGCTGGACGCGTTGATCTCGGTCACCACGGACGAGGACGTGGAGAACATGATGGACGAGTACGACCGCGTCACACACAATCAGAACCCGCGATCGGCGCGGCTCCGGCTCTTCCTCTTCCCCGAAGGAGAAGACTCCCGCGCCAACAGCATCAGCTCGCTCCTAAACGGCTCAGCCAACCGCGAAAACTGGTTCCTAGACGCTTTAAACGGCGGCGTTTCGGGCCTCGAACGTGGCCGCTCCGAAGCCTCCTCCATGGTCTCCGAAGTACCCGATTACCTCTTCGGGTTAGACAACTCGGAAGAAATTACAAATCACCAACACCAACGCGACCCGCGACCCAAACCCGTTCTCCAAGACAGCGTTTCCGTTACGGATCCGGGTTCACCCGCCCCGGTTGTCTCGTCCCCTTATTGTTCCACGTCATCAGCGCCGCACGTGCCTTCTCTCCCGAACCTTCCCCATGTTAAAACCAAACCTTTAAACTTAAACCCGGTTCCTGATACACACTTCAAGGAAAATCAACCCGAACCTGAAACCGAGCCTCAACCGAACCTCTATCTAAATCCAAATAACCCTGTCATTCACTATCCTCCAGAAGCTGCTTATTCGGTAAATCCGGTTCCGGTTTTCTATGTTTCCGGTCCGGTTCGACCGGGAACTGTTCCGGTTCCTATGCAAACCCCTTACCCCTACGTTCAACAACCATATCATGCTGTGATGCCACCTCAGGTTCCAATCGGGTACCATCATTTGGTTCCGGGTTCGGGTCAATTATATGGGGCGGGCGTGAGGCACGTGACCCCACTGCAACCTTACAGCCCCTCCGCCGCGGTGGTTCATGATGGTTTGAAGCAGCATGGGTATCATCCCGTGCCGAATACCGGTTCGGTTCCGGTTCACCCGGTTACACCGATGACGGGTTCGGTTGAACCGCAGAGAGGTGGAGCGGAGTTTGTGGCGGGTCGGGGCCCCAGCTCGTTAAATAACTGA 1275 0.5718 MTSHSHYPPDLDADSVSSSPRSDHFHDAPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVSRSITFSALILKLSKLSGMSNITAKYQLPNEELDALISVTTDEDVENMMDEYDRVTHNQNPRSARLRLFLFPEGEDSRANSISSLLNGSANRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDNSEEITNHQHQRDPRPKPVLQDSVSVTDPGSPAPVVSSPYCSTSSAPHVPSLPNLPHVKTKPLNLNPVPDTHFKENQPEPETEPQPNLYLNPNNPVIHYPPEAAYSVNPVPVFYVSGPVRPGTVPVPMQTPYPYVQQPYHAVMPPQVPIGYHHLVPGSGQLYGAGVRHVTPLQPYSPSAAVVHDGLKQHGYHPVPNTGSVPVHPVTPMTGSVEPQRGGAEFVAGRGPSSLNN* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1606 424 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Gso7g1606 424 MobiDBLite consensus disorder prediction 198 280 - -
Gso7g1606 424 MobiDBLite consensus disorder prediction 402 424 - -
Gso7g1606 424 PANTHER OS05G0427100 PROTEIN-RELATED 5 417 - -
Gso7g1606 424 CDD PB1_UP2 35 134 - -
Gso7g1606 424 MobiDBLite consensus disorder prediction 1 26 - -
Gso7g1606 424 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 5 417 - -
Gso7g1606 424 MobiDBLite consensus disorder prediction 216 242 - -
Gso7g1606 424 SMART PB1_new 46 136 IPR000270 GO:0005515
Gso7g1606 424 Gene3D - 52 135 - -
Gso7g1606 424 SUPERFAMILY CAD & PB1 domains 47 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1606 Gso-Chr7 37851976 37853804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1606 26 171 MAP Kinase Kinase Kinase AT5G57610 44.595 4.07e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1606 - - gmx:100806717 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1606 7 37851976 37853804 Gso8g0506 8 4688613 4690416 GST