Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1604 ATGACCACCAAACGCAAACATGCAAATTTTCTGCTTCCTTTATTCTTCTTCTTCTTCTTCTGTTCTCACACTTTGTTCTCTCATGCAGCCGATTCCATCACAGGAGATACAGTAATCAGAGACAACGATGGGGGTGATACTTTGGTGTCCAAAGACCTCACCTTTGAAATGGGTTTCTTCAGTTTCGATAACTCTTCAAGATACGTTGGGATTTGGTACCACGAGATTCCGGTTAAAACATTCATATGGGTTGCAAACAGAGAAAAACCCATCAAAGGAAGAGAAGGTTTGATCCAAATCAAAACTGACGGCAACTTGGTTGTCCTCGATGGAGAGAGAAACGAGGTGTGGTCAACAAACATGTCAATTCCAAGGAACAACACAAAAGCTGTTCTTCGTGATGACGGCAACCTTGTTCTTTCGGAACACGACAAGGATGTGTGGCAAAGCTTTGAGGACCCAGTTGATACATTTGTGCCGGGTATGGCACTTCCAGTTAGTGCTGGAACGAGCATGTTCAGGTCGTGGAAATCAGCAACGGATCCTTCACCGGGAAACTACTCAATGAAGGTTGACTCTGACGGGTCAACAAAACAGATTTTGATTTTGGAGGGAGAGAAAAGAAGAAGGTGGAGAACTGGGTATTGGGATGGTAGAGTGTTCACTGGTGTCTCCGATGTGACAGGAAGCTCTCTATTTGGTTTTGGAGTAACCACAAACGTTGAAGGAGAAGAATACTTTACATACAAATGGAATAGCCCTGAGAAGGTGAGGTTTCAGATAACTTGGGATGGGTTTGAGAAGAAGTTCGTGTGGGATGAAGATGGGAAACAATGGAATAGGACACAATTTGAGCCTTTTAATGACTGTGAGCATTATAACTTTTGTGGCAGTTTTGCAGTGTGTGATATGGGTAACTCTCCTGTTTGTAGTTGCATGCAAGGGTTTCAGCCAGTGCATTGGGAGGAGTGGAATAATAGGAATTGGTCAAGGGGGTGTGGGAGGAAGACTCCACTAAAGGCTGAGACTGAGAGAGCTGCTAATAGTAGTTCTTCTGGAGCTGAGGTTAGTGTTGGAGAAGATGGTTTCTTGGAGCAAAGGTGTACCAAGTTGCCGGATTTTGCACGGTTGGAGAATTTTGTTGGTGATGCGGATTGTCAGAGCTATTGTCTGCAGAATAGTTCTTGCACTGCTTATTCATATACTATTGGAATTGGGTGCATGATTTGGTATGGGGAGTTAGTCGATGTTCAACACACTAAAAATAATCTTGGAAGTTTACTCAACATCCGTCTTGCTGATGCTGATTTAGGCGAAGGGGAGAAAAAGACCAAAATTTGGATAATATTAGCTGTTGTGGTGGGGTTGATCTGCCTTGGAATCGTTATATTTCTGATATGGAGGTTTAAGAGAAAACCTAAAGCAATTTCCTCAGCTTCTGGTTACAACAACAATAGCGAAATACCAGTCTTTGATCTAACGAGAAGTACAGGCTTATCAGAAATTTCAGGTGAGTTAGGCTTGGAAGGGAATCAACTAAGTGGAGCAGAACTTCCATTGTTCAATTTTAGCTACATTCTAGCAGCAACAAACAATTTCTCAGACGAAAATAAGCTTGGGCAAGGGGGATTTGGTCCTGTCTACAAGGGGAAGTTTCCAGGGGGAGAGGAAGTAGCTGTCAAGAGGCTTTCAAGAAAGTCTAGCCAAGGTTTAGAGGAGTTCAAGAATGAAATGGTGCTAATAGCCAAACTGCAACATAGAAATCTGGTTAGACTATTAGGATGTTGCATTCAAGGGGAAGAAAAGATTCTGGTATACGAGTACTTGCCAAACAAAAGCTTGGACTGCTTTCTATTTGATCCAGTGAAGCAGACACAACTAGACTGGGCAAGACGCTTTGAAATAATTGAGGGCATTGCAAGAGGGCTACTTTATCTGCACCAGGATTCAAGACTTAGAATAATTCATCGCGATCTAAAAGCAAGCAACATTTTGTTGGATGAAAGCATGAATCCAAAAATTTCAGACTTTGGCTTGGCCAGAATATTTGGGGGAAACCAAAATGAAGCCAACACAAACAGAGTGGTTGGTACATATGGTTATATGTCCCCAGAATATGCAATGGAAGGTCTGTTTTCAATTAAATCTGACGTCTATAGTTTTGGCGTATTGCTACTTGAGATTATGAGTGGCCGCAAGAACACTAGCTTTCGTGACACAGAAGACTCAAGTCTTATAGGATATGCCTGGCACCTTTGGAGTGAGCAGAGAGTAATGGAGCTTGTTGATCCTTCCGTTCGAGATTCAATTCCAGAGAGTAAAGCGTTGAGGTTCATACACATAGGGATGTTATGCGTGCAAGATTCAGCATCTCGTAGACCAAACATGTCATCTGTGTTGTTGATGCTGGGAAGTGAAGCCATAGCACTTCCTTTGCCTAAGCAACCTTTGCTTACTACTTCCATGAGGAAACTTGATGATGGAGAATCTTATAGCGAAGGCCTTGATGTGTCAAATGATGTCACAGTTACAATGGTGACAGGGAGATAG 2550 0.4255 MTTKRKHANFLLPLFFFFFFCSHTLFSHAADSITGDTVIRDNDGGDTLVSKDLTFEMGFFSFDNSSRYVGIWYHEIPVKTFIWVANREKPIKGREGLIQIKTDGNLVVLDGERNEVWSTNMSIPRNNTKAVLRDDGNLVLSEHDKDVWQSFEDPVDTFVPGMALPVSAGTSMFRSWKSATDPSPGNYSMKVDSDGSTKQILILEGEKRRRWRTGYWDGRVFTGVSDVTGSSLFGFGVTTNVEGEEYFTYKWNSPEKVRFQITWDGFEKKFVWDEDGKQWNRTQFEPFNDCEHYNFCGSFAVCDMGNSPVCSCMQGFQPVHWEEWNNRNWSRGCGRKTPLKAETERAANSSSSGAEVSVGEDGFLEQRCTKLPDFARLENFVGDADCQSYCLQNSSCTAYSYTIGIGCMIWYGELVDVQHTKNNLGSLLNIRLADADLGEGEKKTKIWIILAVVVGLICLGIVIFLIWRFKRKPKAISSASGYNNNSEIPVFDLTRSTGLSEISGELGLEGNQLSGAELPLFNFSYILAATNNFSDENKLGQGGFGPVYKGKFPGGEEVAVKRLSRKSSQGLEEFKNEMVLIAKLQHRNLVRLLGCCIQGEEKILVYEYLPNKSLDCFLFDPVKQTQLDWARRFEIIEGIARGLLYLHQDSRLRIIHRDLKASNILLDESMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMSPEYAMEGLFSIKSDVYSFGVLLLEIMSGRKNTSFRDTEDSSLIGYAWHLWSEQRVMELVDPSVRDSIPESKALRFIHIGMLCVQDSASRRPNMSSVLLMLGSEAIALPLPKQPLLTTSMRKLDDGESYSEGLDVSNDVTVTMVTGR* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1604 849 Gene3D Phosphorylase Kinase; domain 1 505 608 - -
Gso7g1604 849 SMART blect_4 39 154 IPR001480 -
Gso7g1604 849 Gene3D - 26 151 IPR036426 -
Gso7g1604 849 CDD PAN_AP_plant 360 433 - -
Gso7g1604 849 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 849 - -
Gso7g1604 849 PIRSF SRK 2 849 IPR024171 GO:0004674
Gso7g1604 849 SMART ntp_6 358 432 IPR003609 -
Gso7g1604 849 ProSiteProfiles PAN/Apple domain profile. 358 433 IPR003609 -
Gso7g1604 849 Gene3D Transferase(Phosphotransferase) domain 1 609 809 - -
Gso7g1604 849 SUPERFAMILY Protein kinase-like (PK-like) 518 824 IPR011009 -
Gso7g1604 849 CDD STKc_IRAK 539 803 - -
Gso7g1604 849 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Gso7g1604 849 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 849 - -
Gso7g1604 849 Pfam D-mannose binding lectin 80 177 IPR001480 -
Gso7g1604 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 216 IPR036426 -
Gso7g1604 849 SMART serkin_6 533 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1604 849 CDD B_lectin 44 154 IPR001480 -
Gso7g1604 849 Pfam Protein tyrosine and serine/threonine kinase 536 800 IPR001245 GO:0004672|GO:0006468
Gso7g1604 849 Pfam PAN-like domain 359 417 IPR003609 -
Gso7g1604 849 ProSiteProfiles Protein kinase domain profile. 533 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1604 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Gso7g1604 849 ProSiteProfiles Bulb-type lectin domain profile. 33 153 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1604 Gso-Chr7 37834843 37839219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1604 521 844 Receptor kinase-like Gene Family AT4G11530 60.542 1.47e-133 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso7g1604 PK_Tyr_Ser-Thr 3.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1604 - - gmx:100786721 1706.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1604 7 37834843 37839219 Gso8g0507 8 4701672 4706376 GST
Gso7g1604 7 37834843 37839219 Gso15g0560 15 4957791 4961589 PCT
Gso7g1604 7 37834843 37839219 Gso11g2735 11 43281000 43284775 PCT
Gso11g2733 11 43261551 43265410 Gso7g1604 7 37834843 37839219 PCT