Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1601 ATGGAAATAGCAGTGAAGAGACTGTCAAAGTACTCTGGACAAGGCATAGAAGAGTTTAAAAATGAGGTTCTTTTGATCTCAACGCTCCAACACAGAAATCTTGTGAGGATCTTAGGTTGCTGCATTCAAGGAGAGGAGAAGATGTTAATCTATGAGTATTTGCCTGACAAAAGTTTGGACTTGCGGCTGTCATCAGAATATGCCATGGAAGGACAATTTTCAATAAAGTCTGATGTATACAGCTTCGGAGTTTTACTTCTAGAGATGGTTACGGGCAGAAAGAATAGTGGTCTATATGAAGACATTACAGCCACAAATTTAGTTGGCCATATATGGGATCTATGTAGAGAAGGCAAAACCATGGAGATTGTTGATCAATCATTAGGAGAGTCATGCTCTGATCAAGAAGTACAAAGATGCATCCAAATTGTTCCTTTGTGTGTGCAAGATTATGCTGCTGACAGAGCATCTATGTCAGCAGTTGTTTTCATGTTGGGTAATAACTCTTCCTGCTCCAAAACAACCAGCATTTGTTTTCAAGAAAACTAA 549 0.3898 MEIAVKRLSKYSGQGIEEFKNEVLLISTLQHRNLVRILGCCIQGEEKMLIYEYLPDKSLDLRLSSEYAMEGQFSIKSDVYSFGVLLLEMVTGRKNSGLYEDITATNLVGHIWDLCREGKTMEIVDQSLGESCSDQEVQRCIQIVPLCVQDYAADRASMSAVVFMLGNNSSCSKTTSICFQEN* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1601 182 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 1 61 - -
Gso7g1601 182 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 63 172 - -
Gso7g1601 182 Gene3D Phosphorylase Kinase; domain 1 1 53 - -
Gso7g1601 182 Gene3D Transferase(Phosphotransferase) domain 1 60 179 - -
Gso7g1601 182 SUPERFAMILY Protein kinase-like (PK-like) 2 166 IPR011009 -
Gso7g1601 182 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 63 172 - -
Gso7g1601 182 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 61 - -
Gso7g1601 182 Pfam Protein tyrosine and serine/threonine kinase 1 65 IPR001245 GO:0004672|GO:0006468
Gso7g1601 182 SMART tyrkin_6 1 165 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1601 Gso-Chr7 37822617 37826104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1601 2 63 Receptor kinase-like Gene Family AT4G11530 69.355 1.43e-24 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso7g1601 PK_Tyr_Ser-Thr 2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1601 - - gsj:114419469 363.999