Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1597 ATGGCTGAGGAGTTTCAAGCTAGGATTTGTGGTGAAAACTGGTGGAGTAGTACCACTATTGATTCAACAAGAAGTACTGTGTTGTTCCCTCTAAGTTCATCATCATCATCATCATCTATATCTTCTTCTCCTTGTTCCGTGGCAGCTAATAATTATGATGCAGGAAACTATAGCACTAGGGGAACTAGTGACATGGATTTGAAGGCAACAAAGTGTTGTGCTGAAGAGACTAATAACAGTTTGGTTTCTGACACTACTTACCTGGGTTTTGTTGATGCACACAAGCCACATAAGAGTGAATCAGCAGCTAGTGGAAGTGGTGGCATGTTGACCGATTCCACCTTGCAGATGATGGGTTTTGGCCTCACATCATCATCAGAGAATTGGAATCAGCCTCTATTATTTCGATGTAATGGAAGGGCAGAGAGCAATTTCCACTCCTTGATTCAGGAAGAAACGGGAATAGATTCTTCTAATTCACAAATCCATAGGGATTGGATCCCAAAGAGCTTCTCCTCTGACGGTGGCAAACAACAAATTGATGATAATAATTTCAAGCCATTATTATTGAACCAACAAGAATTTTCATTAGATGACCATAGTCTAAGTTCTTTAACCACCGCTGGGTTATCATCAAACCGTGGATTCCCCAATGGATCAGCCTCATCATATGGTAACCCTTCAACGTTGCAAAGTTTATATGACCCTAATTATAATCCTCATCCACAACACTCACTTTTCACCAACCGTCCGATGTCCTATTCATCAAAAGCATGTTATGGGACACCATGCACTGAACTGCCAACATGGTCTAAAGCTTCCACTTTTTTTAAGCCCACAACCACAACAATTGCAAAGCAGCAACACCCTAATATTGGACTTCACTTTTCAAACAACACTCCTTTCTGGAATGCTTCCGCCGAGGCACTTCACGACATAAGAGTAGGTACCTTTGCTTCAACACAATCACAATATCAAAGGCCAACCTTTGATGATGAAGAGAAACCCAATTTCCCAATTACTCTATTAAACAGGCTCAATAGTGAAGAAATTCTAGAGTCGGCATCAATGGCTAAGAAAAATGTTTGTGAACCAGCATTAAAGAGGCCAAGAATTGAAACTCCATCTCCATTACCAACTTTCAAGGTTCGGAAAGAGAAGCTAGGGGACCGGGTCACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACCGACACAGCATCCGTTCTTCACGAAGCCATCGAGTACATTAAGTTCCTTCATGATCAAGTCAATGTTTTGAGTACTTCATATATGAAAAATGGAGCTCCCACTCAACAGCAGCAGGGCTGTGATGATCTGAAAGACTCAGAAGGACCACAACAAGATTTAAAAAGCAAAGGGCTGTGTCTGGTACCGATTTCAAGCACATTTCCAGTGGCAACAGGAGCCACTAGTGCTGATCAATTGTGGACGCCTACATTCAGAGGCGCACTCTTAAGGTAG 1488 0.4207 MAEEFQARICGENWWSSTTIDSTRSTVLFPLSSSSSSSSISSSPCSVAANNYDAGNYSTRGTSDMDLKATKCCAEETNNSLVSDTTYLGFVDAHKPHKSESAASGSGGMLTDSTLQMMGFGLTSSSENWNQPLLFRCNGRAESNFHSLIQEETGIDSSNSQIHRDWIPKSFSSDGGKQQIDDNNFKPLLLNQQEFSLDDHSLSSLTTAGLSSNRGFPNGSASSYGNPSTLQSLYDPNYNPHPQHSLFTNRPMSYSSKACYGTPCTELPTWSKASTFFKPTTTTIAKQQHPNIGLHFSNNTPFWNASAEALHDIRVGTFASTQSQYQRPTFDDEEKPNFPITLLNRLNSEEILESASMAKKNVCEPALKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTSYMKNGAPTQQQQGCDDLKDSEGPQQDLKSKGLCLVPISSTFPVATGATSADQLWTPTFRGALLR* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1597 495 CDD bHLH_AtbHLH_like 378 429 IPR045239 -
Gso7g1597 495 Gene3D - 382 444 IPR036638 GO:0046983
Gso7g1597 495 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 482 - -
Gso7g1597 495 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 382 436 IPR036638 GO:0046983
Gso7g1597 495 MobiDBLite consensus disorder prediction 437 456 - -
Gso7g1597 495 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 372 421 IPR011598 GO:0046983
Gso7g1597 495 PANTHER TRANSCRIPTION FACTOR BHLH123 79 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1597 Gso-Chr7 37776671 37780730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1597 296 495 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 54.369 1.77e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1597 - - gmx:100784084 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1597 7 37776671 37780730 Gso8g0515 8 4766590 4770431 GST
Gso7g1597 7 37776671 37780730 Gso15g0553 15 4897999 4901402 PCT
Gso7g1597 7 37776671 37780730 Gso11g3029 11 46143744 46149771 PCT
Gso15g0553 15 4897999 4901402 Gso7g1597 7 37776671 37780730 PCT
Gso11g3029 11 46143744 46149771 Gso7g1597 7 37776671 37780730 PCT