Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1570 ATGGCTTCCTCGGAGATCGAGGTGGTTTCATCATCATCGGTCTCCAAACCCAACAACGACCAGCCTCCAATCCTCGACATCTTCACCGCCTCTGCTCACGGCGACTTCAACAAATTGAGAACCTTCGTCGAACAAGACGGCGCCTCCGTCTCTCTTCCCGATTCTAACGGCTATTACGCTCTTCAATGGGCCTCGCTTAACAACTTCCACGACATTGCGCACTATCTCATTCAGCATGGGGCGGATGTCAATGCTAAAGACAACATGCAACAAACGGCATTGCACTGGGCGGCGGTTCGTGGTTCAACTCTAGCTGCTGATGTGCTCGTGGAGAACGGTGCTCGGGTTGAAGCTGCAGACGTAAATGGATACCGGGTAGTGCACTCTACTCATGCAGTTCATGTTGCTGCACAATATGGACAGGCAGCTTTCTTAAATCATATTGTAGTAAAGTACCATGCTGATTTTGATGTGCCTGATAATGATGGATGGAGTCCTCTTCATTGGGCTGCATATAAGGGATTTGCTGACACAATAAGATTGCTTCTATTTAGAGATGCAAGTCAAGGAAGACAAGATAAAGATGGTTGTACACCGTTGCACTGGGCTGCATTAAGAGGAAATGCAGAGGCATGCACTGTGCTTGTACATGCAGGCACAAAGGAAGAACTGATGGTGAAGGACAATTCTGGGAACACACCTGTACAGCTTGCATATGATAAAGGTCATCGGCATGTCGCTCCTTTCCTTTCAAATCAACAACGGGCTAGTAGAAACTACTGGAAAGGGAAACTGTGTAGTGGGATAGTGACAGATATTGGTTATGCTCCCATCTTATTTTGTACTATAATCTTTCTCTCGATCCTCTTCATCAACTCAGTCGTTGCAGCTCCTAACCTTAAAAAGATTACTGCCGTTGTTGGACTTTGGGCATGGACGGCGCTTTCTTCGGCCGTTGGTTCCCTGATTATGTTCTACAAGTGTAGTAGTAAAGATCCTGGTTATATAAAACGACCGGGAGACTTGGGTACTCAAAGTGATACTGAGGATCCGTTATTGAATATTGATCTGAATAGTTCCTCTGTTTGGATGGGAAATTGGTCTCAACTTTGCCCTACCTGCAAGATAATAAGACCTGTCCGATCTAAGCATTGCCCAACTTGTAAGCGATGTGTGGAACAGTTCGACCACCACTGTCCATGGATATCTAACTGTGTTGGGAAGAGGAACAAAAGGGATTTCTTTATTTTTATCTGCCTGGGAACTTTGACTTCTTCCCTTTCTGGTGCCGTTGCAGTTCAAAGAATTTGGACATCTACACCAGCATTACTGGCAGGAGAAACATGGATCCATTATGCGTTAGTAAAACATCCAGGTTTAGTTGTGTTTTTGGTGATGGATGCTGTTGTTTTTTTTGCAGCTACGACATTAACGCTAACACAGGCTTCCATGATAGCTCGAAATGTGACCACAAATGAACTAGCAAATTCCTCCCGTTATGATTACCTTCGTGGTCCTGATGGGCGGTTCAGAAACCCATATAACCACGGTTGTTGGAAGAATTGTGCTGACTTCCTTTTTCTCGGCTATACAAATGATGATGAGATTGCTTGGCCTCCATTACAGCAGGTGGCAACTTAG 1641 0.4522 MASSEIEVVSSSSVSKPNNDQPPILDIFTASAHGDFNKLRTFVEQDGASVSLPDSNGYYALQWASLNNFHDIAHYLIQHGADVNAKDNMQQTALHWAAVRGSTLAADVLVENGARVEAADVNGYRVVHSTHAVHVAAQYGQAAFLNHIVVKYHADFDVPDNDGWSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNAEACTVLVHAGTKEELMVKDNSGNTPVQLAYDKGHRHVAPFLSNQQRASRNYWKGKLCSGIVTDIGYAPILFCTIIFLSILFINSVVAAPNLKKITAVVGLWAWTALSSAVGSLIMFYKCSSKDPGYIKRPGDLGTQSDTEDPLLNIDLNSSSVWMGNWSQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFICLGTLTSSLSGAVAVQRIWTSTPALLAGETWIHYALVKHPGLVVFLVMDAVVFFAATTLTLTQASMIARNVTTNELANSSRYDYLRGPDGRFRNPYNHGCWKNCADFLFLGYTNDDEIAWPPLQQVAT* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1570 546 ProSiteProfiles Ankyrin repeat profile. 195 227 IPR002110 GO:0005515
Gso7g1570 546 ProSiteProfiles Ankyrin repeat profile. 162 194 IPR002110 GO:0005515
Gso7g1570 546 PANTHER PROTEIN S-ACYLTRANSFERASE 24 3 536 - -
Gso7g1570 546 ProSiteProfiles Ankyrin repeat region circular profile. 162 188 - -
Gso7g1570 546 Gene3D - 200 253 IPR036770 -
Gso7g1570 546 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Gso7g1570 546 ProSiteProfiles Ankyrin repeat region circular profile. 56 88 - -
Gso7g1570 546 ProSiteProfiles Ankyrin repeat region circular profile. 89 120 - -
Gso7g1570 546 ProSiteProfiles DHHC domain profile. 369 419 - -
Gso7g1570 546 SMART ANK_2a 230 260 IPR002110 GO:0005515
Gso7g1570 546 SMART ANK_2a 195 224 IPR002110 GO:0005515
Gso7g1570 546 SMART ANK_2a 89 118 IPR002110 GO:0005515
Gso7g1570 546 SMART ANK_2a 128 158 IPR002110 GO:0005515
Gso7g1570 546 SMART ANK_2a 162 191 IPR002110 GO:0005515
Gso7g1570 546 SMART ANK_2a 56 85 IPR002110 GO:0005515
Gso7g1570 546 SUPERFAMILY Ankyrin repeat 27 252 IPR036770 -
Gso7g1570 546 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Gso7g1570 546 PANTHER - 3 536 - -
Gso7g1570 546 Pfam DHHC palmitoyltransferase 369 496 IPR001594 GO:0016409
Gso7g1570 546 Pfam Ankyrin repeats (3 copies) 30 119 IPR002110 GO:0005515
Gso7g1570 546 Pfam Ankyrin repeats (3 copies) 134 219 IPR002110 GO:0005515
Gso7g1570 546 ProSiteProfiles Ankyrin repeat region circular profile. 195 219 - -
Gso7g1570 546 Gene3D - 129 199 IPR036770 -
Gso7g1570 546 Gene3D - 9 128 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1570 Gso-Chr7 37468719 37480994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1570 25 215 Ion Channels AT2G25600 29.688 9.02e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1570 K20032 - gmx:100798740 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1570 7 37468719 37480994 Gso8g0538 8 4951167 4960593 GST