Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1564 ATGGAGAACTATCAGTACCCGGCGTCGTACCCTGACTCCGGCGAGTCGTCGCCGCGCTCCCGCGAGATCGACTTCGAGAACCCGCCGCCGTGGGACGAGCAGCAGAACCAAAACTACAAGGCCAAGTTCATGTGCAGCTACGGCGGCAAGATCCAGCCCCGCACCCACGACAACCAGCTCTCCTACGTCGGCGGCGACACCAAGATCCTCGCCGTCGACCGCTCCGTCAAGTTCCCCGCCTTCCTCTCCAAGCTCGCCGCCGTCTGCGACTCCGCCCCGCAGGACCTCACCTTCAAGTACCAGCTCCCCGGTGAGGACCTCGACGCCCTCATCTCCGTCACCAACGACGACGACCTCGAACACATGATGCACGAGTACGACAGACTCTATCGCCCTAACCTAAAACCTGTTAGAATGAGACTCTTCCTCTTCACGCTCTCTAGTTCAAATCCTAATTCCTCTTTCTCCTCCGAACGCGACCATTTCGTCGAGGCTCTTAATTCGGGTCCGATTCCTTCTCAACCCGACCCGATCAAAACCCCGCCCGTTACGCCTTCTAATGTTGACTATCTCTTCGGTCTCGATAAAGCCGTTGCTCCTCCTCCAAATCTTCCTCCGAACTTCGCAGCGGTTAAATTCCACGATCCGGTGCCGGAGCCTGTCGCGCCGCCGGTAGAGTATCAATCGAGAGGCTCCGATCGGGTTGTTGGATCGGATCCGAATGTGAATCCGATTGAAATTCAGAGACAGTTGCAGCAGGAGATGGAGCGATTGCAGATTGCGGAGAATGAATATCGTAGAAGGAGTGAGGATGGATTTGCAGCCGGTTATGCTGCTGCTGCTGCTGCCGGAGGGGATTATTATATGCAGAAGGTGCAGGAGAAGGTTCCGCCGCAGAATGCGGCGGCGTACTGGTCGGAGAAGCAGTTTTCCGGGGAGGGATATCAGACGACGGTGACGACGGCTCCAGGAGGAGGTGACCAGCCGATGTATGTTATGGCGCCGCCGGGGACGTTCTACCACGCGCCAGTGGTGCGGCCTCCGGCGGCGGCGCAGGGGTACTACGCCGTGCAGAGGATGGGTTCCGAGGGCTACCGCGAGCAGCAGGCGGTTTACGGCGGCGTGGCGCCGTCGAAAGCGGCGTTTTCTTCGGCGGGGATGGCTAAGGGGACGGCGTATTCGGAGGGATATGGTGGCGGCGTGGTGAGGCCTGCGGGGGTGCCGGATAATGCGGCGTACGCGCAGGTGGCGTATGATAGCGCGAGTGGGAGGCAGGTTTACTATACTGCGCAGGGAGGGATGGTGCACGCGCCGCCGCCGCCGCAGTACCAAGGGGTTCCGCCTCAGGAATTTAGGCCGGGTGGGGTTTCGGTGGGGCAAGATGGTAAGGTGGTTAACAAGGTTAACCAAGGTTCTGCGTGA 1422 0.5977 MENYQYPASYPDSGESSPRSREIDFENPPPWDEQQNQNYKAKFMCSYGGKIQPRTHDNQLSYVGGDTKILAVDRSVKFPAFLSKLAAVCDSAPQDLTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRPNLKPVRMRLFLFTLSSSNPNSSFSSERDHFVEALNSGPIPSQPDPIKTPPVTPSNVDYLFGLDKAVAPPPNLPPNFAAVKFHDPVPEPVAPPVEYQSRGSDRVVGSDPNVNPIEIQRQLQQEMERLQIAENEYRRRSEDGFAAGYAAAAAAGGDYYMQKVQEKVPPQNAAAYWSEKQFSGEGYQTTVTTAPGGGDQPMYVMAPPGTFYHAPVVRPPAAAQGYYAVQRMGSEGYREQQAVYGGVAPSKAAFSSAGMAKGTAYSEGYGGGVVRPAGVPDNAAYAQVAYDSASGRQVYYTAQGGMVHAPPPPQYQGVPPQEFRPGGVSVGQDGKVVNKVNQGSA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1564 473 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 469 - -
Gso7g1564 473 PANTHER OS05G0427100 PROTEIN-RELATED 1 469 - -
Gso7g1564 473 MobiDBLite consensus disorder prediction 1 16 - -
Gso7g1564 473 CDD PB1_UP2 44 144 - -
Gso7g1564 473 Coils Coil 248 271 - -
Gso7g1564 473 Gene3D - 61 145 - -
Gso7g1564 473 SMART PB1_new 55 144 IPR000270 GO:0005515
Gso7g1564 473 Pfam PB1 domain 56 144 IPR000270 GO:0005515
Gso7g1564 473 MobiDBLite consensus disorder prediction 1 34 - -
Gso7g1564 473 SUPERFAMILY CAD & PB1 domains 56 150 - -
Gso7g1564 473 MobiDBLite consensus disorder prediction 454 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1564 Gso-Chr7 37417530 37419321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1564 39 168 MAP Kinase Kinase Kinase AT5G57610 41.606 5.09e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1564 - - gmx:100820420 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1564 7 37417530 37419321 Gso8g0544 8 5013156 5014802 GST
Gso7g1564 7 37417530 37419321 Gso15g0520 15 4681366 4683063 PCT
Gso7g1564 7 37417530 37419321 Gso11g2788 11 43629298 43631039 PCT
Gso15g0520 15 4681366 4683063 Gso7g1564 7 37417530 37419321 PCT
Gso11g2788 11 43629298 43631039 Gso7g1564 7 37417530 37419321 PCT