Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1560 ATGCATGTCCAGTTATCCAATCTTAATTTCCCCCATCACCTCTTAGTGATGCTGCTATCCATTTTCTTCCTCTTGATTATCCCCTATGCTTCCTCTTTGTCCTTTAACTTCACTAGTTTCGATCCTAATGACAAGAGCATAGTATTTGAGGGATCAGCAAACCCTGTAGCACCAACTATCCAACTCACACGAAACCAAATGGACAAGGGCATGATTGGAAGCATTGGTCGAGCCACATATTACCAACCTATGCAGCTGTGGGACAAAGCCACAGGGAATCTCACAGATTTCACAACCCATTTTTCTTTTGTCATAGATTCACAGAACCGAAGTAAATATGGAGATGGGATTGCATTCTTCCTTGCCCCTGCTGGTTCAAAGATTCCTAATGCCACAAAAGGAGCTTCTATGGGTCTTACACTTGATAACCAACAATTGAACTCCACAGACAATTCATTTGTTGCTGTGGAGTTTGATATCTATCAGAATGGCTGGGATCCACCCCATGAACATGTTGGAATAGACATCAACTCTATGAGATCTGCTTCTAATGTAACATGGTTGGCTGATATCAAGGAAGGGAAACTCAACGAGGCTTGGATCAGTTACAACTCCAGTTCATTGAATTTGAGTGTTGTGTTCACAGGTTTTAACAATGATACCGATCATACCATTCAGCAGCAACATCTATCTGCTATAGTTGATCTGAGACTTCATTTACCAGAATTGGTTTCTTTTGGCTTCTCAGCTGCCACGGGAAATGCAACTGCTATACATAGTCTCTATTCATGGGATTTTACCTCAACTTTGGCAGCACAAGAAAACATAACAAAGGGAGCAGACCCAGTTGCAAGGTCTCCAACCTCCAATATAGCTCCCAGTCAGAAGAAAAAGAACAAGACAGGCTTGGCAGTGGGATTGAGTATTGGTGGATTTGTTTGTGGGTTGGGTTTGATTTCAATTGTCTTGTGGAAGAAGTGGAAGAAAGGAACGGAAGAGGAAGAACATGATTTTGAAGAGTTTATGGGTGAGGATTTTGGAAGGGGGGTAGAGACCAGGAAGTATTCATATGCTGAATTAGCACAGGCAGCTAATGGTTTCAAAGATGAGCAAAAACTAGGTCAGGGAGGATTTGGTGGTGTTTATAGGGGTTATCTTAAAGACATAAAGTCTCATGTTGCCATTAAGAGGGTGTCAGAAGATTCTGATCAAGGGATAAAGGAGTTTGCATCAGAAATAAGAACTATTAACCGGTTAAGGCATCGAAATCTAGTGCACTTGATTGGTTGGTGTCATGAAAGGAAAAAGCTATTGCTTGTGTATGAGTACATGCCAAATGGAAGCTTAGATACTCATCTCTTCAAGAAGCAAAGTTTGTTGAAATGGGCGGTGAGATATAACATAGCTCGAGGATTGGCCTCTGCATTGCTATACTTGCACGAGGAATGGGAACAATGTGTTGTGCATAGAGACATAAAGTCAAGCAACATTATGCTGGATTCGGAGTTTAATGCCAAACTTGGGGATTTTGGTTTAGCAAGGTTTGTGGACCATGCAAAAGGTGCACAAACTACAGCTTTAGCTGGCACTATGGGCTACATGGCTCCTGAATGTGCTACCTTGGGCAGGGCTAGTAAGGAATCAGATGTCTACAGTTGTGGAGTTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCCATCAACCTTAAGGCACAAGAAAATGAAATAAATATTGTGCAGTGGGTGTGGGAACTCTTTGGAGGAGGGAGAATTCTTGATGCAGCAGATCCAAGACTAGAAGGGGATTTTGAGGAGGAGCAAATCAAATGCTTGATGATTGTTGGTCTTTGGTGTGCTCACCCTGACCATAATAATAGGGCTTCAATTAGGCAAGCAATTCAAGTGCTTAACTTTGAAGCTCCCTTGCCCAATCTTCCATCAAGTTTGCCAGTTCCAACATATCTTGATGGCCCCTTGCACTCATCGATAGCACCATTCAGCATAACTGCTTCAGTGGAAGGTCATAGCCAGATCAGAAGCTCCACTGCAAACACAAACTCCTCTGGGTTCACCACAACTTCTGATGATGCTTCTCCCTCTGTGTCGCTTCTGTACTCACGGTGGATTGCTTTAAGGAACCTAGTGTTGGAGGATCGAGAAACAATGCTCTAA 2172 0.4263 MHVQLSNLNFPHHLLVMLLSIFFLLIIPYASSLSFNFTSFDPNDKSIVFEGSANPVAPTIQLTRNQMDKGMIGSIGRATYYQPMQLWDKATGNLTDFTTHFSFVIDSQNRSKYGDGIAFFLAPAGSKIPNATKGASMGLTLDNQQLNSTDNSFVAVEFDIYQNGWDPPHEHVGIDINSMRSASNVTWLADIKEGKLNEAWISYNSSSLNLSVVFTGFNNDTDHTIQQQHLSAIVDLRLHLPELVSFGFSAATGNATAIHSLYSWDFTSTLAAQENITKGADPVARSPTSNIAPSQKKKNKTGLAVGLSIGGFVCGLGLISIVLWKKWKKGTEEEEHDFEEFMGEDFGRGVETRKYSYAELAQAANGFKDEQKLGQGGFGGVYRGYLKDIKSHVAIKRVSEDSDQGIKEFASEIRTINRLRHRNLVHLIGWCHERKKLLLVYEYMPNGSLDTHLFKKQSLLKWAVRYNIARGLASALLYLHEEWEQCVVHRDIKSSNIMLDSEFNAKLGDFGLARFVDHAKGAQTTALAGTMGYMAPECATLGRASKESDVYSCGVVALEIACGRKPINLKAQENEINIVQWVWELFGGGRILDAADPRLEGDFEEEQIKCLMIVGLWCAHPDHNNRASIRQAIQVLNFEAPLPNLPSSLPVPTYLDGPLHSSIAPFSITASVEGHSQIRSSTANTNSSGFTTTSDDASPSVSLLYSRWIALRNLVLEDRETML* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1560 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Gso7g1560 723 MobiDBLite consensus disorder prediction 677 698 - -
Gso7g1560 723 PANTHER RECEPTOR LECTIN KINASE 17 705 - -
Gso7g1560 723 ProSiteProfiles Protein kinase domain profile. 367 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1560 723 Gene3D Phosphorylase Kinase; domain 1 351 443 - -
Gso7g1560 723 SUPERFAMILY Protein kinase-like (PK-like) 351 662 IPR011009 -
Gso7g1560 723 ProSitePatterns Protein kinases ATP-binding region signature. 373 396 IPR017441 GO:0005524
Gso7g1560 723 Pfam Protein kinase domain 367 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1560 723 Gene3D Transferase(Phosphotransferase) domain 1 444 657 - -
Gso7g1560 723 PANTHER - 17 705 - -
Gso7g1560 723 Gene3D - 30 280 - -
Gso7g1560 723 SMART serkin_6 367 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1560 723 Pfam Legume lectin domain 32 276 IPR001220 GO:0030246
Gso7g1560 723 CDD STKc_IRAK 373 637 - -
Gso7g1560 723 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 273 IPR013320 -
Gso7g1560 723 CDD lectin_legume_LecRK_Arcelin_ConA 33 270 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1560 Gso-Chr7 37364254 37369399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1560 16 654 Receptor kinase-like Gene Family AT5G10530 46.483 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso7g1560 Pkinase 1.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1560 - - gsj:114419429 1400.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1560 7 37364254 37369399 Gso8g0551 8 5106226 5108597 GST
Gso11g2797 11 43734036 43736476 Gso7g1560 7 37364254 37369399 PCT