Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1559 ATGCAGCTACCCCCAAGCAAGGGATATTTGCACAATTCCATTTCCACCCCATCCAACATCAATTCTCTAGTAATGGCAGCATCTCGTTACTGTAAGAAAAGTTATGTGCATGCTTCTTTTCATGCAATAACATTAACACTCTTGCTTCTTGCAATACCTCATGCAGCTTCATTATCTTTCAACTATCAGCAACTTGGTGACACGGGAATCGCCCTCAATTTTTCAGGAAAAGCCCGTCGTGACAATGATGTCATCAACCTCACCAGGTCTGAGCCAGATAGTTATGGCAGAGTTACATATTACGAACTATTGCATCTTTGGGACAAGAACTCAGAAAAAGTTACAGACTTCACTACCCATTTCTCCTTTACCATCAACACCCCAAATAAAACTCATCATGGAGATGGCATCACCTTCTTTCTGGCACACCCAGACTTCCCACAATCTGACATAGATGGAAGTGGTATCGGTCTAGCGAGCCGAGAACAACTGAAGAATCTAAATTTCGCAAAGGATTATCCATTTGTAGCGGTGGAATTCGATACCTTTGTTAATGACTGGGATCCGAAATATGACCATGTCGGTATTGATGTTAATTCTATTAACACTACTGACACTACAGAATGGTTCACCAGCATGGATGAGAGAGGGTATGATGCTGATGTTAGTTACGATTCTGGTTCAAACAGATTAAGTGTCACCTTCACTGGATATAAGGATGATAAAAAAATTAAACAGCACTTATTCTCTGTGGTCAATCTGAGTGATGTGTTACCTGAATGGGTTGAAATTGGTTTCTCTTCAGCAACAGGAGATTTTTATGAGGAACATACTCTTAGCTCATGGTCCTTCAACTCTAGTTTAGGCCCGAAACCGCAAAAGGGTGGAAGCAAAACAGGGCTGGTGATAGGGCTGAGTGTTGGACTTGGAGCAGGCGTATTATTTGTTATTTTGGGGGTAACTTTCCTCGTGAGATGGATACTGAGGAATAGAGGTGTGGAGGAAGTCTCACTTTTTGATCATACTATGGACAATGATTTCGAAAGAATGTCTCTACCCAAGAAGTTTTCCTATGAAGAACTTGCAAGAGCAACTAATAACTTTGCGAGCGAAAACAAAATCGGACAGGGAGGATTTGGGGCAGTCTACAGGGGATTTATGCGAGAGTTGAATGCCCATGTTGCCATTAAGAAGGTGTCTCGCGGATCTAGACAAGGGGTAAAGGAGTATGCATCTGAAGTAAAGATCATTACTCAACTCAGGCATAAAAATTTGGTTCGACTCTTTGGGTGGTGCCATGAGAACAATGACCTGCTGCTGGTTTATGAGTTCATGGAAAATGGAAGCTTGGATTCTTATCTATTTAAAGGAAAGGGTCTGCTGACATGGAAAGTGAGATATGATATTGCTAGAGGTCTGGCCTCAGCATTATTATACCTGCATGAAGAGTGGGAAGAATGTGTGCTTCATAGAGACATAAAATCCAGCAATGTTATGTTGGATTCTAATTTTAATGCAAAGCTCGGAGATTTTGGGTTAGCCAGACTAATGGATCATGCAATAGGATCCAAAACAACTGGTTTAGCAGGAACAATTGGATATTTGCCTCCTGAAGCTGCCACAAGAGGCAAGGCTAGTAGGGAGTCTGATGTATACAGCTTTGGAGTTGTTACTTTGGAGATAGCCTGTGGTAGAAAGGTTATTGAACCTAATCTGAATGAAGAACAGATCTATTTGGTGGATTGGGTTTGGGAACACTATGGTATGGGTGCTCTCCTAAAAGCATCTGATGCAAGCTTATATGGACACTTTGATGAGAAGGAAATGGAAAGATTAATGATAGTTGGCCTTTGGTGCACTCATTCTGATTTCCTTCTGAGGCCTACAATTAGGCAAGCTGTTCAAGTGCTTAATTTTGAAGCTCCACTGCCCATTCTCACATCTTTCAGCTCTATGTCCTCTAGGACTCCTGCTTCTGCAAATAACCAACACGTGTCCTCAAATTCAAGCAGTAGCTTACTCACTGAATCCTTACAATCGAGCACAACTATTGACCTCATTTCTCCAGCAGCTGCATATTTACATACGTACTAA 2094 0.4164 MQLPPSKGYLHNSISTPSNINSLVMAASRYCKKSYVHASFHAITLTLLLLAIPHAASLSFNYQQLGDTGIALNFSGKARRDNDVINLTRSEPDSYGRVTYYELLHLWDKNSEKVTDFTTHFSFTINTPNKTHHGDGITFFLAHPDFPQSDIDGSGIGLASREQLKNLNFAKDYPFVAVEFDTFVNDWDPKYDHVGIDVNSINTTDTTEWFTSMDERGYDADVSYDSGSNRLSVTFTGYKDDKKIKQHLFSVVNLSDVLPEWVEIGFSSATGDFYEEHTLSSWSFNSSLGPKPQKGGSKTGLVIGLSVGLGAGVLFVILGVTFLVRWILRNRGVEEVSLFDHTMDNDFERMSLPKKFSYEELARATNNFASENKIGQGGFGAVYRGFMRELNAHVAIKKVSRGSRQGVKEYASEVKIITQLRHKNLVRLFGWCHENNDLLLVYEFMENGSLDSYLFKGKGLLTWKVRYDIARGLASALLYLHEEWEECVLHRDIKSSNVMLDSNFNAKLGDFGLARLMDHAIGSKTTGLAGTIGYLPPEAATRGKASRESDVYSFGVVTLEIACGRKVIEPNLNEEQIYLVDWVWEHYGMGALLKASDASLYGHFDEKEMERLMIVGLWCTHSDFLLRPTIRQAVQVLNFEAPLPILTSFSSMSSRTPASANNQHVSSNSSSSLLTESLQSSTTIDLISPAAAYLHTY* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1559 697 SMART serkin_6 368 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1559 697 CDD STKc_IRAK 374 638 - -
Gso7g1559 697 Pfam Legume lectin domain 57 297 IPR001220 GO:0030246
Gso7g1559 697 ProSitePatterns Legume lectins beta-chain signature. 176 182 IPR019825 -
Gso7g1559 697 Gene3D Transferase(Phosphotransferase) domain 1 445 651 - -
Gso7g1559 697 ProSitePatterns Protein kinases ATP-binding region signature. 374 398 IPR017441 GO:0005524
Gso7g1559 697 SUPERFAMILY Concanavalin A-like lectins/glucanases 56 289 IPR013320 -
Gso7g1559 697 Gene3D Phosphorylase Kinase; domain 1 353 444 - -
Gso7g1559 697 Pfam Protein kinase domain 369 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1559 697 CDD lectin_legume_LecRK_Arcelin_ConA 58 288 IPR001220 GO:0030246
Gso7g1559 697 ProSitePatterns Legume lectins alpha-chain signature. 258 267 IPR000985 -
Gso7g1559 697 ProSiteProfiles Protein kinase domain profile. 368 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1559 697 PANTHER - 42 695 - -
Gso7g1559 697 PANTHER LECTIN RECEPTOR KINASE 42 695 - -
Gso7g1559 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Gso7g1559 697 SUPERFAMILY Protein kinase-like (PK-like) 352 647 IPR011009 -
Gso7g1559 697 Gene3D - 55 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1559 Gso-Chr7 37360761 37363111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1559 41 648 Receptor kinase-like Gene Family AT5G10530 47.115 3.68e-173 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso7g1559 Pkinase 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1559 - - gmx:100817213 1365.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1559 7 37360761 37363111 Gso8g0553 8 5116175 5118623 GST