Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1557 ATGTTGCGGCTGTCGATTCAACGAGTGAGGAAGTTGAACTTTCTCAGTCCCCAGATCTCTGCTTTGGGAAGGTCCCATTTGTCAACTGCTGCTGAACCATCTTCCAGTAAGAGCAATCCACCGAGGGTTCCAAATCTTATTGGAGGCAGTTTTGTTGACTCAAAAGCATCAACTGTCATTGATGTTATAAACCCAGCAACCCAAGAAGTTGTTTCACAAGTTCCTTTGTCTACTGATGAAGAGTTTAAGGAAGCTGTATCAGCAGCAAAGAAGGCATTTCCATCATGGCGTAACACTCCAATTACAACACGCCAACGTGTTATGCTGAAGCTTCAAGAGCTTATACGCAGAGATATGGATAAACTTGCTCTGAATGTGACCACTGAACAAGGAAAGACATTGAAGGATGCCCAAGGAGATGTATTTCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTGCAAATGGGGGAGTATGTTTCCAATGTATCACATGGAATTGATACTTATAGCATTAGAGAACCACTTGGTGTTTGTGCTGGTATTTGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTTCCTATGGCTATTACCTGTGGTAATACCTTTGTTCTAAAACCATCAGAGAAAGACCCAGGTGCTTCTGTAATGCTTGCAGAATTGGCATTGGAGGCTGGTTTGCCTGAGGGTGTCTTAAATATAGTTCATGGAACCCATGATATTGTGAATGCTATTTGTGATGATGACGACATCAAAGCCATATCCTTTGTTGGTTCAAATGTTGCCGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAACGCGTTCAGTCTAACATGGGAGCCAAAAATCATGCGATTGTCATGGCAGATGCAAATGTTGATGCTACTCTTAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGTATGGCTCTCAGTACAGTTGTTTTTGTTGGAGGCTCAAAACCATGGGAGGATAAACTTTTAGAGCATGCCAAAGCTCTTAAAGTAAATGCCGGAACTGAACCTGATACAGATCTTGGTCCGGTGATCAGCAAGCAGGCAAAGGAGAGAATACACAGATTAGTTCAATCTGGGGTTGAAAGTGGTGCCAGACTACTGCTTGATGGAAGAAATATAGTGGTCCCAGGATATGAATCTGGCAATTTTATTGGTCCAACCATCTTATCAGATATCAATGCCAACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTTTTCATGGAGGCTGATAGCTTGGAAGAAGCCATAAACATTATCAACAGTAACAAGTACGGAAATGGTGCTTCTATATTTACTACATCTGGTGTTGCTGCAAGGAAATTTCAGACTGAGATAGAGGCTGGACAGGTTGGCATCAATGTCCCCATTCCAGTTCCTTTGCCCTTCTTCTCATTTACCGGCAACAAGGCATCGTTTGCCGGTGATCTCAACTTCTATGGCAAGGCAGGGGTTAACTTCTATACACAGATTAAGACAATAACACAACAATGGAAGGATTCAACTGGTGGTAGCAAGATTAACTTGGCAATGCCAACCTCTCAAAAATAA 1614 0.4281 MLRLSIQRVRKLNFLSPQISALGRSHLSTAAEPSSSKSNPPRVPNLIGGSFVDSKASTVIDVINPATQEVVSQVPLSTDEEFKEAVSAAKKAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPMAITCGNTFVLKPSEKDPGASVMLAELALEAGLPEGVLNIVHGTHDIVNAICDDDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMADANVDATLNALVAAGFGAAGQRCMALSTVVFVGGSKPWEDKLLEHAKALKVNAGTEPDTDLGPVISKQAKERIHRLVQSGVESGARLLLDGRNIVVPGYESGNFIGPTILSDINANMECYKEEIFGPVLLFMEADSLEEAINIINSNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSTGGSKINLAMPTSQK* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1557 537 Coils Coil 537 537 - -
Gso7g1557 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 496 IPR016162 GO:0016491
Gso7g1557 537 SUPERFAMILY ALDH-like 39 520 IPR016161 GO:0016491
Gso7g1557 537 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 45 519 IPR010061 GO:0004491
Gso7g1557 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 313 324 IPR016160 GO:0016491
Gso7g1557 537 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 24 537 IPR010061 GO:0004491
Gso7g1557 537 Pfam Aldehyde dehydrogenase family 51 515 IPR015590 GO:0016491
Gso7g1557 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 288 488 IPR016163 GO:0016620
Gso7g1557 537 CDD ALDH_F6_MMSDH 43 519 IPR010061 GO:0004491
Gso7g1557 537 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 24 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1557 Gso-Chr7 37342637 37349183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1557 1 503 Aldehyde Dehydrogenase Gene Family AT2G14170 79.722 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1557 K00140 - gmx:100791508 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1557 7 37342637 37349183 Gso8g0555 8 5136711 5143957 GST