Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1538 ATGGTCGGCGGCGGTGGGAACCGACCGGAGGCGGAGCGGTGGCTCTACACCGCCAACAAGCTCCTGAGCGCGCGTGACCTGCACGGCGCGCGCTCCTTCGCGATCCGCGCGCGTGAGTCGGACCCGACCTACGAGGCCTCGGAGCACCTCCTGACGGTGATCGACACGCTCCTCGCCGGCGAGTCGCGGATCAACGACCACCACCGCGATTGGTACGGGATCCTCCAAATCCTCCGCTACACCACCAACATGGACCACATCGCCGCCCAGTATCGCCGCCTCGCGCTCCTCCTTGACCCTCACCGCAACATGTTCGCCTTCGCCAGCCACGCCTTTTCCCTCGTCAACGATGCCTGGTCCGTGCTCTCCATTCCCGCCAAGAAAGCCATGTACGACAGCGAGCTCCGCTTGCTCACCGCTCCGGCGCCGCAACATTATTCTCTTCCCCCGCAGCCTCAACCCACGCCGAGGCGGAACCCTAGATCCAGGGATAATTCGGCCAAGTTAAATCCTAATCCCACCCCGAACCGTGCCGAGTCGACTCGGACCGTGGAAACTGACACGGGAACGAGTTTCTGGACCTCGTGTCCTTATTGTTATGTTCTGTATGAATATCCGAAGGTTTATGAAGAGTGTACCTTACGGTGCCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGATACGGTCGCCGCCACCGTTGAGTGGGAAAGACGGTTCTTATTGTAGTTGGGGGTTTTTCCCATTAGGGTTTTCTGGGAATTCAAAGGATGTGAATGGGCATGCCTCGAATTGGAACCCGTTTTCGCCTTTGTTTCCTTGTCCCTTGAAGGGGTCGTCCTATAGGAGGCCTCAGAGGAATTGGGCTTACTATGACGACGAGGCTGCGGCGGCGTTTATCGAGTTGTCGGACCCAAGCGACGACGATTCCGGTGACGGGGACTGGAGGGGTGGGAAGAATAGGGGGAGGAAGAGGACTAGAGGGAAGAAAAATTCTGGTGATGGTAGGAGGGAAACTGTGAAGAGACCTAGGAGGGGTGCTCCTGTAGGAAATGAGAATTTGGGTTCTGGTGATGCTGCTACTGGTGCTAGTGCAGATGCTAATGTTGCCTCTGCTGTGCCGGCTGGTGCGAGGGGGGAGTCTAGTAAGAAGGCTGCGTTGGGTGGTTCGAGGAGGCGGGGTGCTGGGAACTTGGGGAAGTTGGATTTGAATGTGGAGTTCAGCAATGAGGTGGAGGAGCCTTCCCGTGGAGTGCGCGACCGCGAAGGGAATGCTGCTGGACATGCTGAGGATAATATTGAAGGGATTGGTTTTTTTGAAGGCCTTGACGAGTTCCTCAGTAGCTTGCCCATTCTCAATGTTGTGGCAGATGATAAGGTAGACGATCCTCCTCTACTCTGCATCTATTGCCTTTAG 1416 0.5699 MVGGGGNRPEAERWLYTANKLLSARDLHGARSFAIRARESDPTYEASEHLLTVIDTLLAGESRINDHHRDWYGILQILRYTTNMDHIAAQYRRLALLLDPHRNMFAFASHAFSLVNDAWSVLSIPAKKAMYDSELRLLTAPAPQHYSLPPQPQPTPRRNPRSRDNSAKLNPNPTPNRAESTRTVETDTGTSFWTSCPYCYVLYEYPKVYEECTLRCQSCRRGFHAVVIRSPPPLSGKDGSYCSWGFFPLGFSGNSKDVNGHASNWNPFSPLFPCPLKGSSYRRPQRNWAYYDDEAAAAFIELSDPSDDDSGDGDWRGGKNRGRKRTRGKKNSGDGRRETVKRPRRGAPVGNENLGSGDAATGASADANVASAVPAGARGESSKKAALGGSRRRGAGNLGKLDLNVEFSNEVEEPSRGVRDREGNAAGHAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVDDPPLLCIYCL* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1538 471 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 4 462 - -
Gso7g1538 471 MobiDBLite consensus disorder prediction 165 184 - -
Gso7g1538 471 SMART dnaj_3 69 127 IPR001623 -
Gso7g1538 471 MobiDBLite consensus disorder prediction 142 184 - -
Gso7g1538 471 MobiDBLite consensus disorder prediction 331 345 - -
Gso7g1538 471 SUPERFAMILY Chaperone J-domain 66 135 IPR036869 -
Gso7g1538 471 CDD DnaJ 70 123 IPR001623 -
Gso7g1538 471 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 462 - -
Gso7g1538 471 Gene3D DnaJ domain 59 144 IPR036869 -
Gso7g1538 471 MobiDBLite consensus disorder prediction 302 393 - -
Gso7g1538 471 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Gso7g1538 471 Pfam DnaJ domain 70 132 IPR001623 -
Gso7g1538 471 MobiDBLite consensus disorder prediction 408 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1538 Gso-Chr7 37178631 37181956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1538 10 460 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 43.319 2.09e-108 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1538 - - gmx:100811866 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1538 7 37178631 37181956 Gso8g0571 8 5268836 5271902 GST
Gso7g1538 7 37178631 37181956 Gso15g0495 15 4445561 4447532 PCT
Gso7g1538 7 37178631 37181956 Gso11g2812 11 43857642 43859527 PCT
Gso15g0495 15 4445561 4447532 Gso7g1538 7 37178631 37181956 PCT
Gso11g2812 11 43857642 43859527 Gso7g1538 7 37178631 37181956 PCT