Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1522 ATGAGATGTCTTGTGTTCAAGCATGAGGGAGAGATCGTTGTTTCGGATGCTAGCTTGGAAACCCTAGCTTCGGTTCGGAGGGGTTGGTGGTGTTGCGATAGCATGAGCGGCTGGACGACCGGTGGTGGGGTCTCTGAGGTGTGCGGTGGCGTCGTGATTGCTCCTGTTTGCCATTGTTTGCAAAACCAAAAAGTGATGTCTCGCAAAGAAAATCTGATATCTGAGTTACACACCAGAAAAGGAACATGGAAAATAGTTGTGCGTATCACTGATCTTTGGCAAGCTCGAAAGCAAAATAGTAAACAAACAATTGAGATGGTGTTGATAGACCAAACGGGTTCAAAAATTGGAGCTACTCTCTGGCAAGAACTCTTCACTGAATTGAGGGACAAGTTACAGTGTGGTTCTTCGTATTTGATTCAAAACCTGAGGATTGTTGACAACCAATCTGAATACAGAGTCAGCCCAGCTCCATATTTGGTTTATTTCCTAAAAACTACATCTGTCAAGGAAATCCACCGTCCAGAAATTCCTTCTAATATTTATCTCATTACTCCTTTTAGTGATATAATCTCTGGCCTCGCACCACGCCATACTTTAGTGGATATTGTTGGTGTGGTTGCTGATTTCATCGATGTTAAGACAGTTAATCCCCCTCACAGGATGACAGTAAGGCTCAGGGATAACAGTAACTGCGACATTCTAATAACTGTTTGGGAGGACTATGCTATTCAGCTAGATGATGCTATTGACAAAAACCTTATGCTTCAGGAACCATTGGTTGTTATGTTGACCCTAGGTAAAATCAAGGATGCTACAAGTGTGTCTGGTGTTGATGGTTCTCAGTCCCAATCTAGCCAGAGTAATGTGGTGGAAAAATTTATGCAGAATGCTCAGGTGGTCAGTATAGGTGAAATCAACAATCTCAGACAGGATTGTTACTGCTTAACTGTTGGAACAGTTGATGAAATCATTATTGAAGCTCCATGGAGTTATGACAGTTGTCCTAACTGTACAACCACATTTGATCCATCAAAAGGTGACTCAGCTTGTCGTTCTTGCCATACCAGTGTGATCGATACAGTTCCACAGTATAAATTAAATGTTAGGATGGAGCATAATGGGGACAAAGGAAACTTCTTTCTCTGGGATGCAACATGA 1161 0.422 MRCLVFKHEGEIVVSDASLETLASVRRGWWCCDSMSGWTTGGGVSEVCGGVVIAPVCHCLQNQKVMSRKENLISELHTRKGTWKIVVRITDLWQARKQNSKQTIEMVLIDQTGSKIGATLWQELFTELRDKLQCGSSYLIQNLRIVDNQSEYRVSPAPYLVYFLKTTSVKEIHRPEIPSNIYLITPFSDIISGLAPRHTLVDIVGVVADFIDVKTVNPPHRMTVRLRDNSNCDILITVWEDYAIQLDDAIDKNLMLQEPLVVMLTLGKIKDATSVSGVDGSQSQSSQSNVVEKFMQNAQVVSIGEINNLRQDCYCLTVGTVDEIIIEAPWSYDSCPNCTTTFDPSKGDSACRSCHTSVIDTVPQYKLNVRMEHNGDKGNFFLWDAT* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1522 386 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-LIKE 72 386 - -
Gso7g1522 386 Gene3D - 176 314 IPR012340 -
Gso7g1522 386 CDD RPA1_DBD_A_like 84 169 - -
Gso7g1522 386 Pfam Domain of unknown function DUF223 105 199 IPR003871 -
Gso7g1522 386 SUPERFAMILY Nucleic acid-binding proteins 184 275 IPR012340 -
Gso7g1522 386 PANTHER REPLICATION FACTOR A 1, RFA1 72 386 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gso7g1522 386 SUPERFAMILY Nucleic acid-binding proteins 72 172 IPR012340 -
Gso7g1522 386 Gene3D - 69 171 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1522 Gso-Chr7 36535573 36551655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1522 73 276 Core DNA Replication Machinery Family AT2G06510 25.221 3.09e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1522 - - gsj:114420636 764.222