Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1518 ATGGGTTTGGTTATTCCTGAAGAAGAACTAAGCTTAGATTTGAGACCCTCTTTTGTTCCAAAAACCATCACTGATTTTCTCTGCCACCTTTCCACCACCCCAAATGCATCCGTCAAGGTGTCCTTGCTCGATGACTTTGTCCACAGATTGCAACTCGAATTGGCCAAGATCCAAGCATTCAAACGCGAACTTCCTCTCTGCATGTTCCTCTTAAATGATGCAATTTCAGCGTTGAAGGTGGAATCAGAAAAATGCATGGCTTGCAAGTCTGAGCCAGTGTTGGAGGAGTTCATTCCTCTGAAGAAAGAGTGTGATCAGAGGGAGGAAAGTGAGAAGGAGAAGGAATGCAGGGACAAGAAGAGTTGGATGAGTTCTTTTCAGCTTTGGAACACTGATGATAAAGCTGATATTAACAACAATGCATATGAATGTGACAAAAAACAAAACTACGGAGTTGAAGACAAGAATAATAGAGAAGAAAGAAAATCTGTGGCCAAGGACTTGTTCCAATATGGTGGAATTAGAAATGGAGAGAAGGGGTTTGTTATGCCTTTTTCCACTTACCCTGCATCAAAGGAAGTAAAGGAAGATTGTGTTTTCAATGGACTTTCTCTTCAGACACCTGGAACTGCAGTGAAGAACACAAGGGAGGGATCTGGTTGCAGAACCAGCTCTTGCAGGGTGGTTTCCTCGGCTCCTTCACCGCTGCGTCAGCCACAAAGTGGCCGGAAACAAAGGCGGTGCTGGTCGCCGGAGTTGCATAGCCGGTTTGTTAAGGCTTTAGAGGAGCTTGGAGGTTCTCAAGCAACTACTCCAAAGCAAATTAGGGAACTCATGAGGGTAGATGGCCTGACCAATGATGAAGTAAAGAGTCATTTACAAAAATATCGACTTCATACACAGCGAGTTCCAGTTGCTAAAGCTGCAAATTCTAATCGCTCTGCCGTAGCTCTTGGAGGCTTGTGGATGCACAATGAATCCTTAAAGGGTAGAAGTTCTGGTTCTCCTCAAGGCCCTCTCCAATTAGCTACACAATCGGGGGAAGCGACATCCCGAACTGAAGGTGACAACATGATAGATGATGATGTAAAATCAGACTTATAA 1104 0.4438 MGLVIPEEELSLDLRPSFVPKTITDFLCHLSTTPNASVKVSLLDDFVHRLQLELAKIQAFKRELPLCMFLLNDAISALKVESEKCMACKSEPVLEEFIPLKKECDQREESEKEKECRDKKSWMSSFQLWNTDDKADINNNAYECDKKQNYGVEDKNNREERKSVAKDLFQYGGIRNGEKGFVMPFSTYPASKEVKEDCVFNGLSLQTPGTAVKNTREGSGCRTSSCRVVSSAPSPLRQPQSGRKQRRCWSPELHSRFVKALEELGGSQATTPKQIRELMRVDGLTNDEVKSHLQKYRLHTQRVPVAKAANSNRSAVALGGLWMHNESLKGRSSGSPQGPLQLATQSGEATSRTEGDNMIDDDVKSDL* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1518 367 MobiDBLite consensus disorder prediction 328 353 - -
Gso7g1518 367 SUPERFAMILY Homeodomain-like 242 302 IPR009057 -
Gso7g1518 367 Pfam Myb-like DNA-binding domain 246 297 IPR001005 -
Gso7g1518 367 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 365 IPR044787 GO:0003700|GO:0006355
Gso7g1518 367 Gene3D - 243 301 - -
Gso7g1518 367 MobiDBLite consensus disorder prediction 327 367 - -
Gso7g1518 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 243 301 IPR017930 -
Gso7g1518 367 PANTHER TRANSCRIPTION FACTOR HHO6 9 365 - -
Gso7g1518 367 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 244 299 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1518 Gso-Chr7 36402365 36405337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1518 9 323 G2-like Transcription Factor Family AT2G03500 36.176 6.01e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso7g1518 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1518 - - gmx:100803341 741.88