Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1506 ATGGAGGATTTGCAAACAATAGAACAACACCGTCAAGAGGTTTGCCTTGGAAACCTCAAGAAGTTCCACTTTAGAGAACTTCAGCTTGCTACAAATAACTTCAGCAGCAAGAACTTGATTGGAAAAGGTGGATTTGGAAATGTCTACAAAGGGTATCTCCAAGATGGTACGGTTATAGCAGTAAAAAGGCTTAAAGATGGTAATGCCATTGGAGCTACAAAGAGGCTCTTGGTTTATCCCTACATGTCAAATGGCAATGTTGCTTCCCGTCTAAAAGGTAATGTCTATTCTTGCGATCCAAAGATTATTCATAGGGATGTGAAGGCAAGAAATATCTTGCTTGACGATTATTGTGAGGTTGTGGTGGGAGATTTTGGGTTGGCAAAGCTATTAGACCATAGGGATTCACATGTGACAACAGCAGTGAGAGGCACTGTGGGGCACATAGCCCCTGAGTATCTCTCTACAGGCCAATCTTCTGAGAAAATAGATGTATTTGGGTTTGGAATTCTGCTTCTTGAACTGATATCTGGCCAAAGAGCTCTTGACTTTGGGAAAACAGCAAGTGAAGAGATTCAGGTTCTCCAAGAGCAAATGAAAGAAGCACATGCTTCTGAGATGGATTCAATCAAGCAGCTTTCATTTGAGACAGAAACCGCAAGAAGGGAAGAGGAAGAAATGAGATCCAAAACACAAGAGCTGAAGAAAGACGCTGAAAAATCCAAAGCAGTGGTAGAAGAACAAGAGAAGAAACTAGAGTTTTATCTAAAGCAAGCTGAGGGTGCAAAAGCATCAAAACAAAGAGCCATTGAGGAGATGAAGATGAAGACATGA 834 0.4137 MEDLQTIEQHRQEVCLGNLKKFHFRELQLATNNFSSKNLIGKGGFGNVYKGYLQDGTVIAVKRLKDGNAIGATKRLLVYPYMSNGNVASRLKGNVYSCDPKIIHRDVKARNILLDDYCEVVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKIDVFGFGILLLELISGQRALDFGKTASEEIQVLQEQMKEAHASEMDSIKQLSFETETARREEEEMRSKTQELKKDAEKSKAVVEEQEKKLEFYLKQAEGAKASKQRAIEEMKMKT* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1506 277 PANTHER PROTEIN NSP-INTERACTING KINASE 2 15 71 - -
Gso7g1506 277 PANTHER PROTEIN NSP-INTERACTING KINASE 2 97 227 - -
Gso7g1506 277 PANTHER PROTEIN NSP-INTERACTING KINASE 2 71 93 - -
Gso7g1506 277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 102 114 IPR008271 GO:0004672|GO:0006468
Gso7g1506 277 MobiDBLite consensus disorder prediction 215 242 - -
Gso7g1506 277 SMART serkin_6 34 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1506 277 MobiDBLite consensus disorder prediction 214 242 - -
Gso7g1506 277 Gene3D Phosphorylase Kinase; domain 1 4 78 - -
Gso7g1506 277 PANTHER OS01G0253100 PROTEIN 71 93 IPR045271 GO:0004714|GO:0006468
Gso7g1506 277 PANTHER OS01G0253100 PROTEIN 97 227 IPR045271 GO:0004714|GO:0006468
Gso7g1506 277 PANTHER OS01G0253100 PROTEIN 15 71 IPR045271 GO:0004714|GO:0006468
Gso7g1506 277 Pfam Protein kinase domain 99 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1506 277 Coils Coil 217 276 - -
Gso7g1506 277 ProSiteProfiles Protein kinase domain profile. 1 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1506 277 Gene3D Transferase(Phosphotransferase) domain 1 94 275 - -
Gso7g1506 277 SUPERFAMILY Protein kinase-like (PK-like) 19 192 IPR011009 -
Gso7g1506 277 ProSitePatterns Protein kinases ATP-binding region signature. 40 62 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1506 Gso-Chr7 35601274 35602998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1506 9 203 Receptor kinase-like Gene Family AT5G16000 61.382 2.12e-95 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gso7g1506 Pkinase 5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1506 - - gmx:100794494 536.954