Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1491 ATGACTGTGGATGAAGTGGATAGTAGCTCTGAGTGGAGCAGAGAGCAGGATAAAGCATTTGAAAATGCGTTGGCAACTCATCTGGAGGATGCTTCAGATCGATGGGAGAAGATTGTGGCTGACGTGCCGGGGAAGACTATAGAAGAAATCAAACAGCATTATGAGCTCTTGGTTGAAGATATTAACCAGATCGAATCCGGTTGTGTGCCTCTTCCGTCTTATAATTCTTCTTCAGAGGGCTCAACAAGCCATGCTAGTGATGAAGGAGCTGGCAAGAAGGGCAGCGGTCCTGGACATTATAGCAGTGAGTCTAATCATGGAACTAAGGCTTCAAGATCAGATCAGGAACGACGAAAGGGGATTGCTTGGACTGAGGATGAACACAGGTTATTTCTTCTGGGCTTGGATAAGTATGGCAAAGGTGACTGGCGAAGCATATCAAGGAACTTTGTGGTGACAAGAACACCTACACAAGTAGCAAGCCATGCCCAAAAATACTTCATTCGTTTGAACTCCATGAACAAAGATAGAAGGCGATCCAGCATACATGATATCACCAGCGTTATCAATGGAGACATTTCAGCACCTCAAGGACCAATAACCGGTCAAACAAACGGTTCTGCTGGAAATTCTACTGCCAAAGCAGCCAAAACGGACACCCCGGCATCAACAGGGGTGCCAGGTGTTGGTATCTATGCTGCTCCAACCATTGGACAACCAATAGGAGGACCCTTAGTATCTGCTGTTGGCACCCCAGTGAACCTTCCTGCACCTGCACACATGGCATATGGAGTCCGAGCCCCGGTTCCCGGTGCAGTCGTACCTGGTGCACCAGTAAATATGGGCCCTATGACGTACCCTATGCCGCATACATCGGCTCCTCACAGGTGA 891 0.4837 MTVDEVDSSSEWSREQDKAFENALATHLEDASDRWEKIVADVPGKTIEEIKQHYELLVEDINQIESGCVPLPSYNSSSEGSTSHASDEGAGKKGSGPGHYSSESNHGTKASRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVINGDISAPQGPITGQTNGSAGNSTAKAAKTDTPASTGVPGVGIYAAPTIGQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGAVVPGAPVNMGPMTYPMPHTSAPHR* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1491 296 Gene3D - 121 173 - -
Gso7g1491 296 MobiDBLite consensus disorder prediction 193 219 - -
Gso7g1491 296 CDD SANT 11 58 IPR001005 -
Gso7g1491 296 ProSiteProfiles Myb-like domain profile. 115 167 IPR001005 -
Gso7g1491 296 PANTHER HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED 7 284 - -
Gso7g1491 296 MobiDBLite consensus disorder prediction 193 221 - -
Gso7g1491 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 171 IPR017930 -
Gso7g1491 296 PANTHER TRANSCRIPTION FACTOR KUA1 7 284 - -
Gso7g1491 296 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 119 169 IPR006447 GO:0003677
Gso7g1491 296 Gene3D - 5 71 - -
Gso7g1491 296 SMART sant 8 60 IPR001005 -
Gso7g1491 296 SMART sant 119 169 IPR001005 -
Gso7g1491 296 CDD SANT 122 167 IPR001005 -
Gso7g1491 296 MobiDBLite consensus disorder prediction 72 119 - -
Gso7g1491 296 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Gso7g1491 296 SUPERFAMILY Homeodomain-like 117 172 IPR009057 -
Gso7g1491 296 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Gso7g1491 296 ProSiteProfiles SANT domain profile. 123 171 IPR017884 -
Gso7g1491 296 Pfam Myb-like DNA-binding domain 122 167 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1491 Gso-Chr7 34379594 34392453 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso7g1491 Myb_DNA-binding 7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1491 - - gmx:100779792 580.867