Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1487 ATGGCCAAGAGTGATAGAAAGAATGGCCAAGAGGGAAACAAATTACAAACTGATAGTATGGCACTTAAATGCAAAAACAAAATCCCCGGCAACGGCGCCAAAAACTTGTTAGCTCTTTCAATTATGGCACGTCCTCCTAATAACATCAAGTCTATTAATGGATCAAAAGAGGCACTTAAACTTGTCGTAAGAATTAATGATCTTTGGTTCATTGGGACTCCAAACAGATCTGAACAAGCAGAAATGGTCATAATTGATTCTCATGGAGATACAATCCATGTTGTCTGTAAACAAGATCAGTTAAAATCTTGGAAGGCTGATTTGATTGAAAATTATACTTACGTAATGCATAATTTTAAAGTCATGAAGAATGATGACCAATTTAGAATCTGTGATCACCAGTATAAATTAGTTTTTACTGGAGTTACTGTTCTCAGGCAATCCAATTTGGAGGATCTTCCCTTTAAGAAATATCAATTTGCTGATTTCACTAATATCGTTGCTGGGCTCTTCGAACCTAAATTGTTGGTTGACATTATTGGTGTCGTGGATGAGGTAGTCTATCGTCATGTGGGATCAGAGAATACAAGGGTTGTTTTCAAACTCAAGGATTTGAGTGGGCAAATCCTGTCTTGCACTCTGTGGGATAGTTATTGCTTGCAGTTCATAGACTACTTGAATCAGTCTGAAAACGATCTCCCCATCATTATTATATTGATGCATTCAGGTCCGGTCAGTTTCACAGCTGGTGACCAGGGGAGTTCCCAGGTTTCAGGTTCAAGCCAATTGTCGTCAAAAGATGCATTTCTTTCAAAAGCTGAGGCAAAGACAATCTTTGACATTAACAACATTTCTAAGGAAATTGTTTGTGTTACTGTCGACACCATTAATAGAATTGTTATGGATAACCATTCACAGTGTTATCCAGCCTACAGTTACTGCTATAGAAAAACTGATATTGAGACAATCGCATTCACATGTGCATGTAGCAAACATAATGATCAAGTTGTGCTGAGGTATAGAGTCGAGGTGATGGTCACCTACAAAGAACAAAGCACAAAATTTTTTATGTGGGACCGTGAATGCATTGAGCTGATTGGACAATCAGCTAATGAATTTAACAAGCTGAAAATAGAAGAGGGTGATATTGATTTGAATGTTTCTCCTCTGGCTCTTGATAAGTTGCTGGGTTATGTCCTTGCATTTAAAATCAAAGTTCAACCCAAGTTTAACAATAATGTTGTTCTTAGATACTCAAATGACTTAGATTTGATCAATGTTGTGGTGGATATACTGCCTGATGCTGAGCAATCTATGTCTGGCACAGCAGATCATGATCCACTTCTGGGTCTTCCATTGACACCTACAAAACGGTTACCATTTGATGACTATGATGATGAACCGAAAGCCTCTCAGATTTCACCGGCCTAG 1431 0.3816 MAKSDRKNGQEGNKLQTDSMALKCKNKIPGNGAKNLLALSIMARPPNNIKSINGSKEALKLVVRINDLWFIGTPNRSEQAEMVIIDSHGDTIHVVCKQDQLKSWKADLIENYTYVMHNFKVMKNDDQFRICDHQYKLVFTGVTVLRQSNLEDLPFKKYQFADFTNIVAGLFEPKLLVDIIGVVDEVVYRHVGSENTRVVFKLKDLSGQILSCTLWDSYCLQFIDYLNQSENDLPIIIILMHSGPVSFTAGDQGSSQVSGSSQLSSKDAFLSKAEAKTIFDINNISKEIVCVTVDTINRIVMDNHSQCYPAYSYCYRKTDIETIAFTCACSKHNDQVVLRYRVEVMVTYKEQSTKFFMWDRECIELIGQSANEFNKLKIEEGDIDLNVSPLALDKLLGYVLAFKIKVQPKFNNNVVLRYSNDLDLINVVVDILPDAEQSMSGTADHDPLLGLPLTPTKRLPFDDYDDEPKASQISPA* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1487 476 CDD RPA1_DBD_A_like 60 144 - -
Gso7g1487 476 Gene3D - 253 425 IPR012340 -
Gso7g1487 476 SUPERFAMILY Nucleic acid-binding proteins 49 145 IPR012340 -
Gso7g1487 476 Pfam Domain of unknown function DUF223 81 168 IPR003871 -
Gso7g1487 476 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 52 373 - -
Gso7g1487 476 SUPERFAMILY Nucleic acid-binding proteins 275 414 IPR012340 -
Gso7g1487 476 Gene3D - 45 147 IPR012340 -
Gso7g1487 476 PANTHER REPLICATION FACTOR A 1, RFA1 52 373 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gso7g1487 476 CDD RPA1_DBD_B_like 178 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1487 Gso-Chr7 33761957 33766702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1487 84 293 Core DNA Replication Machinery Family AT4G19130 22.685 1.71e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1487 - - gmx:102667961 942.184