Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1479 ATGTCTCGCAAAGAAAACCTCCTATGTGAACTGCATACAAAGAAAGGTACTTGGAAGATTGTCGTGCGAATAACTGATATATGGCGTCTTAACAAACATAATGGTCGACAATCCATTGAGATGGTGTTGATGGACCATACGGGTACAAAGATTGGGGCAACTCTATGGCAAGAATTGTTCCCTGAATTTGAGCCCAAGTTGCGTTGTGGTGGTGTATATGTTATTCAGAACGTGAAGGTTGTTGATACTCATTCTGACTACAAAGTGAATGCAATTAAATATTTGGTTTATTTTGTGAAGACAACGTCTGTCAAAGAGGTGGACAGACATGAGATTCCTCCTAATGTTCATGTCATTACTTCATTTGCTGATATAATTTCAGGCGTTGCAAAACTTGATACTTTAGTTGATATTGTGGGTGTTATTGCTGAAGTGATTGAACGCAAAACAGTTAATCCAGCATACAGAGTGACTGTCAAGTTGAGAGACAATAGTCATGTTGAGATCATCATGACTGTGTGGGAGGAATATGTTCTTCAGCTGAATGATGCTATTGAGAAAAACCATTTTGGGCAAAAGCCATTGGTTGTTATGCTAACTCTTGCTAAGATCAAAGAACCCAAGGACAAGTATCCCCTCAGTGTACAGAATATAAAGCATGGTTCGAAGTTGTATGTGAATGGTGACAAAAACGAAATTCAACAATTCCATGATAGTTTACGTGTGCCATTTTATATTGGCGGTCTAGATGATGAGGGTGGTGTTTCTCAGTCACAATCTACCCAGAATTGCCAAGATAAGTTTTTGCATAATGCTCAAATAGTGAGCTTTGGTGCAATAAAGACTCTGCGACAGGATTGTTACTATTTGACTGTGGGCACTGTCGATGAGGTGATGATTGATACTCCATGGAGTCATGACAGTTGTCCATACTGTACAACCACTTTTGATCCATTAAAAATAGGTGCAGCCTGCCGTTCGTGCCAGAATCATGTTACTCACACTATTCCAAGATATAAGTTAGTTGTCAAGATGGAACAGAATGGGGAGAAGGCGAACTTCCATTTTTGGGATGCAGTATGTATCAAAATATTTGGTAAAACTGCAGATGAATGTCGTCAAGATTTGATTGCGAGTGGTGATGAGATCAAGGTGTTCCCTGCGTGTGTTGATCAATTGTTGGGTAAAACTTGGGTTGTCAGATTCAAACACCGTATACAGATGCAACAATCATCCGTGTTGGATTTTAGTGAACAGGAACATCATATACAGTCAGTGATATCCACGCTAGGTCTACAGGATGAACAATGTATAAGCAACAAGTCAGCCGATGTTAGTGCTGCATCTTCATCACAACAAGATTACCATCCTACACCTTCATTGTCAAAGTCATCTGAATATGATCCTGGAAATGTTGCCTTTGTAATTCTTGCAAAAAAAACGTCTGATCAGCAAGGAAGTAGTCAGTTTGATAGTGACAACTTCACAACATAA 1494 0.3942 MSRKENLLCELHTKKGTWKIVVRITDIWRLNKHNGRQSIEMVLMDHTGTKIGATLWQELFPEFEPKLRCGGVYVIQNVKVVDTHSDYKVNAIKYLVYFVKTTSVKEVDRHEIPPNVHVITSFADIISGVAKLDTLVDIVGVIAEVIERKTVNPAYRVTVKLRDNSHVEIIMTVWEEYVLQLNDAIEKNHFGQKPLVVMLTLAKIKEPKDKYPLSVQNIKHGSKLYVNGDKNEIQQFHDSLRVPFYIGGLDDEGGVSQSQSTQNCQDKFLHNAQIVSFGAIKTLRQDCYYLTVGTVDEVMIDTPWSHDSCPYCTTTFDPLKIGAACRSCQNHVTHTIPRYKLVVKMEQNGEKANFHFWDAVCIKIFGKTADECRQDLIASGDEIKVFPACVDQLLGKTWVVRFKHRIQMQQSSVLDFSEQEHHIQSVISTLGLQDEQCISNKSADVSAASSSQQDYHPTPSLSKSSEYDPGNVAFVILAKKTSDQQGSSQFDSDNFTT* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1479 497 SUPERFAMILY Nucleic acid-binding proteins 120 242 IPR012340 -
Gso7g1479 497 Pfam Domain of unknown function DUF223 40 135 IPR003871 -
Gso7g1479 497 Gene3D - 7 109 IPR012340 -
Gso7g1479 497 CDD RPA1_DBD_B_like 137 236 - -
Gso7g1479 497 SUPERFAMILY Nucleic acid-binding proteins 284 410 IPR012340 -
Gso7g1479 497 PANTHER REPLICATION FACTOR A 1, RFA1 10 398 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gso7g1479 497 SUPERFAMILY Nucleic acid-binding proteins 8 108 IPR012340 -
Gso7g1479 497 Gene3D - 110 243 IPR012340 -
Gso7g1479 497 Gene3D - 252 430 IPR012340 -
Gso7g1479 497 MobiDBLite consensus disorder prediction 448 467 - -
Gso7g1479 497 CDD RPA1_DBD_A_like 19 104 - -
Gso7g1479 497 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-LIKE 10 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1479 Gso-Chr7 33471567 33474130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1479 1 428 Core DNA Replication Machinery Family AT5G08020 20.174 2.60e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1479 - - gmx:102667453 992.26