Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1471 ATGGCTTCAAAATCATCCGCTGACTTAACGAATACAAGTAGCAGTTTTGATTCATCAACAGCTACAAGCAAGGTGTCATGTGCTGCTGGATTGCCGGTCCATTCTATTCAATATCAAATTCACACAGAACCATTAATCCTACAATTCACTGTAGTATTCCGCAATGATATGGACATGATAGAAGTGTCATCCTTTTACCACCGACAATGGGCACCAGATTACCTTGAACTAATGGCATGTATTGCTGACAAGATAAAAACCATCGATGGATCTAAAGAAACTTTGAAACTTGCTGTAAGGATAACCGATCTCTGGTTTGTTGGGACACCGGGCAGGTCTGAACAAGCTGAGAAGATCATTGTTGACTCTGACGGTGATCAGATCCACGTGGTCTGTAAGCAAGACCAGTTAAAGGCATGGAAAATGGATTTGAAGGAAGGTTGTAGTTATTGTGGCTTAGATGGCGTTCCTTTAAAAAAGTATAGATTTGTAGATTTTTCAGATATCATTGCTGGCCAATTACAGTTTGACCTATTAGTAGACATCATTGGTGTTGTTGACGAGGTTGTCTTTCGTCATATTTCACCCAGAAGTAAGAGAGTTGTTTTTAAGCTTATGAATTTGAGTAACGAATTGGTGTCTTGCACTCTATGGGACGATTATTGTGTCCAATTTCTGGAATATTTGGATCAGCATGAGAATGAAGGGCCTATTATTGTGTTGTTGACCAATGCCAGAATTAAAGAGGGCCAGGGATACTATCCATGCTTGGTTAGCAATTCTTTGAAGGCTTCTACACTGACTATTAATGAACCACTATCACTAATTGAAGAATTCAATCAGAAGCTTTCAGAATTGGGCATTGAGATCCGGTCAATTTTGACACGTCGTTCCCAGTGGAGTTCACAGCCTTCAGGTTCTGCTCAGTTACCATCAAGGGAGACATTCATTTCCATGTCAGAGGCAAAGAGCATTTCTGAGATAAACAACCTTTGCAAAGAGTTTGTTTGTGTTACTGTTGGTACAATCACAAGGATTCTTATGGACAATCATTCATGGTGTTATCCATCTTGCATTCAGTGCTATAAGAAAATAGATGTCTATCCAGAACCATTTGTGTGCCCATGTGGCAAACATAATGATCGGGCTGTGCTTAGATATAGAGTTGAAGTCATGGTCAATTATAAAGATGAAAACACAAAATTTCTCCTGTGGAATTGTGAATGCACTGAATTGATTGGGCAGTCAGCTGATGAAGTCAACACCCTCAAAATAGAAGATGGTGATCTAGATTTAAATGCCTCCCCAAAAGCACTTGATAAACTACTGGGTCATCTGTTCACCTTCAAAGTCAAAATTCAGCCGCAGTATAAAAATTCTACTGTTTTGAAGTGCTCCAGTGACTTAACTTTAATTAATGATGTTCTGGACATGTTGCCTGATGTTGAGACATGTTCAAAGATTGAAGCTACAACATCGTTTGATTCCAATGATCCTGTCCACGATGAATGTCAATTCATTTCTATAACAGCAGACCATGATCCACTTATTGGACTTCCCTTGACACCAACAAAACGACAACCATTTAATGAATGTGATGATGAAGCAAGAAGCTCCCAGATTTCACCAGCTCAGCTATCGTCCAACAAATTAGCAAAACATGAGAAGATAGAATAG 1677 0.393 MASKSSADLTNTSSSFDSSTATSKVSCAAGLPVHSIQYQIHTEPLILQFTVVFRNDMDMIEVSSFYHRQWAPDYLELMACIADKIKTIDGSKETLKLAVRITDLWFVGTPGRSEQAEKIIVDSDGDQIHVVCKQDQLKAWKMDLKEGCSYCGLDGVPLKKYRFVDFSDIIAGQLQFDLLVDIIGVVDEVVFRHISPRSKRVVFKLMNLSNELVSCTLWDDYCVQFLEYLDQHENEGPIIVLLTNARIKEGQGYYPCLVSNSLKASTLTINEPLSLIEEFNQKLSELGIEIRSILTRRSQWSSQPSGSAQLPSRETFISMSEAKSISEINNLCKEFVCVTVGTITRILMDNHSWCYPSCIQCYKKIDVYPEPFVCPCGKHNDRAVLRYRVEVMVNYKDENTKFLLWNCECTELIGQSADEVNTLKIEDGDLDLNASPKALDKLLGHLFTFKVKIQPQYKNSTVLKCSSDLTLINDVLDMLPDVETCSKIEATTSFDSNDPVHDECQFISITADHDPLIGLPLTPTKRQPFNECDDEARSSQISPAQLSSNKLAKHEKIE* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1471 558 SUPERFAMILY Nucleic acid-binding proteins 322 459 IPR012340 -
Gso7g1471 558 MobiDBLite consensus disorder prediction 1 20 - -
Gso7g1471 558 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 88 407 - -
Gso7g1471 558 Gene3D - 305 475 IPR012340 -
Gso7g1471 558 MobiDBLite consensus disorder prediction 534 549 - -
Gso7g1471 558 Gene3D - 155 290 IPR012340 -
Gso7g1471 558 MobiDBLite consensus disorder prediction 522 558 - -
Gso7g1471 558 CDD RPA1_DBD_B_like 181 281 - -
Gso7g1471 558 PANTHER REPLICATION FACTOR A 1, RFA1 88 407 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gso7g1471 558 CDD RPA1_DBD_C 319 465 IPR013955 -
Gso7g1471 558 SUPERFAMILY Nucleic acid-binding proteins 161 280 IPR012340 -
Gso7g1471 558 Pfam Replication factor-A C terminal domain 341 458 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1471 Gso-Chr7 32815193 32836104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1471 157 454 Core DNA Replication Machinery Family AT5G08020 25.890 2.90e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1471 - - gmx:102666564 1125.92