Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1470 ATGCTTCTACATTGTGTTGTTGCACATGAATCAATTGGAAAATCATTACCCAAGGCTTTTCTAGAGCGTGTCAAAGATGAATTTGTGTCAAAATATGGTGGTGGAAAGGCTGCCACAACTCTTGCAAATAGCCTTAACAAGGAATTTGGCTATTTGCACACGCCAAAGTTGAGGGAACATATGCAGTATTGTGTTGATCATCCTGAAGAGATAACCAAGCTTGCAAAGGTGAAACCTCAAGTTTCTGAACTTAAGGGTGTCATGATGGAGTTTTTTAAGAAAAGGACAATTATTGTGGACCGATTGGGGAATGGACACTTCTCTACGATACAATCTGCCATTGATTCAGTCGCTTCCTACAACAAGAATTGGGTTTATATCTATGTGATGGCAGGCACCTACAGGGAAAAGGTGAAGATCACTTCTGACAAGCCTTTCATCGTACTAAAAGGAGAGGGACAAAAGAACACTTTTGTTGAGTGGCATGACCATGATTCAAGTGCAGAGAGTCCTACGTTCACAACCATGGCCGACAATGTCGTCGTCAAGTCCATTAGCTTTAGGAATACATACAATAATAACAGAAATGCTAACTCAATGGAAGCTGCGGTAGCTGCAATGATATTTGGCGACAGGTCGTACTTCTATGACGTTGGCTTCTTTGGTTTGCAAGACACTTTGTGGGATGGACAAGGAAGACATTACTTCAAGTCTTGTACAATTCAAGGTGCTATGGATTTTATCTTCGGCACTGGCCAATCTTTATATGAGGACTGTACCATATCCGCTATTGGTGCTAATCTTGGTCCTGGCATTATTGGTTTTATCACGGCACAAGGGAGAACAAATCCAAACGATGCAAATGGGTTTGTTTTTAAGCATTGCAATATCGTTGGAAATGGTACAACTTACTTGGGAAGACCATGGAGAGGTTATGCTAGAGTTCTTTTCTATGATACTAAAATCTCTAACATTATCCAACCATTAGGTTGGCAGCCATGGGATTTCGCTGGGCACGAGGATCACATAACATTCGCAGAGTATGGCAATTCTGGACCTGGTTCTGACACTTCCAAGCGAGTAAGTTGGTTAAAGAAATTGGATTCATCAACAGTTAGCAAGTTGGCAACTACTAGCTTCATTGACACCGAAGGTTGGCTAAATACACTGACGCAGCTCTAA 1182 0.4154 MLLHCVVAHESIGKSLPKAFLERVKDEFVSKYGGGKAATTLANSLNKEFGYLHTPKLREHMQYCVDHPEEITKLAKVKPQVSELKGVMMEFFKKRTIIVDRLGNGHFSTIQSAIDSVASYNKNWVYIYVMAGTYREKVKITSDKPFIVLKGEGQKNTFVEWHDHDSSAESPTFTTMADNVVVKSISFRNTYNNNRNANSMEAAVAAMIFGDRSYFYDVGFFGLQDTLWDGQGRHYFKSCTIQGAMDFIFGTGQSLYEDCTISAIGANLGPGIIGFITAQGRTNPNDANGFVFKHCNIVGNGTTYLGRPWRGYARVLFYDTKISNIIQPLGWQPWDFAGHEDHITFAEYGNSGPGSDTSKRVSWLKKLDSSTVSKLATTSFIDTEGWLNTLTQL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1470 393 Gene3D - 94 392 IPR012334 -
Gso7g1470 393 CDD Longin 5 64 IPR010908 -
Gso7g1470 393 SUPERFAMILY Pectin lyase-like 94 389 IPR011050 -
Gso7g1470 393 SUPERFAMILY SNARE-like 4 50 IPR011012 -
Gso7g1470 393 Gene3D Longin domain 2 93 - -
Gso7g1470 393 PANTHER PECTINESTERASE 10-RELATED 90 390 - -
Gso7g1470 393 Pfam Pectinesterase 97 383 IPR000070 GO:0030599|GO:0042545
Gso7g1470 393 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 90 390 - -
Gso7g1470 393 ProSiteProfiles Longin domain profile. 1 53 IPR010908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1470 Gso-Chr7 32666647 32676954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1470 97 387 Carbohydrate Esterase AT1G05310 41.611 1.05e-74 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1470 - - gmx:100812950 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1470 7 32666647 32676954 Gso2g0715 2 7464949 7469026 GST