Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1468 ATGAAAGCCTATGTTGTGGTGTTGTTGTTGTTTTGTGTGGGGTTTTTTGAGTGTGCATGGTGTCAGAATAACGATGTGGCTGTGATGAACACGCTCAAGAAGGCCATTAAAGAGCCCAATGATCTTCAATGGAACGACCCTGATGTGTGTAAATGGGAACACGTTCAGTGCAACACCATGAAGAGGGTCACTGCAATTCAGATTGGTGGACAAAGCCTAAACGGTTCTCTGCCTAAGGAACTGTTGCAGCTCTCAGAGTTGACGCGTTTCGAGTGCATGAACAATGCCTTCACTGGACCATTCCCTAACATGCCAAAGTCCCTCGAGGTTCTTCTCATCCACAACAACAATTTCAACTCCATGAGTGGTGATTTCTTCAATGGCATGACTAATTTGCAGGATGTGAGCATTGGCTACAACCCTTTCTCTAATTGGGAGATTCCTGATAGCCTCAAGGACTGTGATGATCTCAGGAGTTTCTCTGCAATCAGTGCTGGCCTTGTGGGGAGAATTCCGGATTTTTTGGGTAAAGACGGTCCCTTTCCGGGTTTGGTTTCTCTTAGCTTGAGTTTCAATTCTCTTGAAGGAGGGTTGCCTGCAACCTTCTCTGGGAGTTCTATAGAGACCCTTTGGGTGAATGGTCAGAATAGTGATGGTAAACTCAATGGCACCCTAGATGTGTTAAAGGGAATGATGTATTTGAAGCAAATTTGGGTACATGGCAACTCATTCACCGGTCCTATCCCGGACTTGTCCAACCATGATCAACTGTTTGATGTGAGTTTGAGGGATAATCAGTTAACTGGGGTTGTTCCACCCTCTCTCACTGCTCTTCCTGCTCTTAAAGTTGTGAACTTGACCAATAACTTGCTTCAAGGGTCTCCTCCTTTGTTCAAAGATGGTGTGCGGGTCGATAACGATTTGGAGAAGGGGACGAATAGCTTTTGCACAAAGAAGGCTGGTGAACCGTGTAGTCCCCTTGTGGATGCTTTGCTGTCTGTTGTTGAACCTTTGGGGTATCCTCTGAGACTCGCGGAAAGTTGGAAGGGGAATGATCCTTGTGCTCAAAGTTGGATTGGGATTGTTTGCTCAAGTGGTAATGTTTCCATTGTTAGCTTTCAGAGCTTGAATCTCTCTGGCAAAATTTCTCCCAGTTTTTCTAGGCTTACATCTTTGACAAAGTTGCTTCTTGCTAACAATGACCTCACCGGTACCATACCAAGTGAACTTACCAGTATGCCTCTTTTGAAAGAGTTGGATGTTTCCAATAATAAATTGTTTGGTAAGGTGCCATCTTTCCGTGGGGATGTAGTTCTTAAAACTGGTGGGAATCCTGATATTGGAAAGGATGCATCTCAAGCACTGCCCGGCTTGAGTCCTGGAGGTAAATCTGGAAGTGAAGGTAAGAAACATAATACTGGAGCAATTGTTGGCACTGTGGTGGGGAGTTTCAGTTTACTTGGTATAGCAGCTCTGGTGTTTGCTATGTATCGTAGAAAACATAAGCGTGCCAGCAAAGTGCAAAGTCCTAGTGCAATAGTGGTGCATCCTGGTCATTCCGGAGATGGAAATGCTCTGAAGATAAGTGTTTCAGGTACAGGTGTTGGTGTTAGTAGTGATGGTGGTGGTGGTGGAGGAACTGGTGTATTTAGTACAACTAGTAGTGTTCAACATTTGGAAGCTGGTAATATGGTGATTTCAATCCAAGTTTTGAGGGAAGTTACAAACAATTTCAGTGAGGGAAACATACTGGGGAGAGGTGGTTTTGGCACTGTATACAAGGGAGAATTGCATGATGGAACAAAAATTGCTGTAAAAAGGATGGAATCTGGGATGATGGGTGAGAAGGGGCTGACTGAGTTTGAGTCTGAAATTGCAGTACTTACAAGGGTTCGACATAGGCATCTGGTTGCACTTGAAGGTCATTGCTTGGATGGAAATGAGAGGCTTCTTGTGTATGAATACATGCCTCAAGGTCCTCTTAGTAAGCATTTATTTGAATGGAAAGAAGAAGGGTTACTGCCACTGGAGTGGAAGAGAAGGCTTTCCATTGCTTTGGATGTTGCTAGAGGGGTTGAGTATCTTCATGGTTTGGCCCAACAAATTTTCATCCATAGGGATATAAAACCATCAAACATCTTGCTCGGGGATGATATGCGGGCCAAAGTGTCAGACTTCGGATTGGTTCGGCTTGCTCCAGAAGGAAAGGCCTCATTTGAGACTAGGCTTGCTGGAACATTTGGATATTTGGCTCCAGAGTATGCAGTCACTGGACGAGTTACAACGAAGGTTGATGTATACAGCTACGGGGTGATTCTCATGGAGATGATAACAGGAAGGAAAGCAATTGACAACAGCCAACCAGAAGAGAATGTCCACCTCGTTACATGGTTCAGAAGGATGCTACTGAACAAAGACTCTTTCACAAAGCTCATTGACCCCATAATGGATGTTGATGAGGAGACCTTACCAAGTTTTAGGACTGTGGCCGAGTTGGCCGGCCACTGTTGTGCGAGGGAGCCCTACCAGCGCCCTGACATGAGCCATGTGGTGAATGTTTTGGCACCTCTTGTCGAGATTTGGAAGCCTTCTGAAGCAGATGATGATGACATTTATGCGATTGACTTGGATATGACCTTACCTCAAGCACTCAGTAAGTGGCAGGCTATTGAAGGAAAGAACACCTTTGATGTTTCATGCACTTCATCAATGCTTACTAGTGGAGATACTACACAGTCTAGCATACTAACTAGGCCTTCTGGATTTGCTGATTCCTTTACTTCCAATGATGGAAGGTGA 2799 0.4477 MKAYVVVLLLFCVGFFECAWCQNNDVAVMNTLKKAIKEPNDLQWNDPDVCKWEHVQCNTMKRVTAIQIGGQSLNGSLPKELLQLSELTRFECMNNAFTGPFPNMPKSLEVLLIHNNNFNSMSGDFFNGMTNLQDVSIGYNPFSNWEIPDSLKDCDDLRSFSAISAGLVGRIPDFLGKDGPFPGLVSLSLSFNSLEGGLPATFSGSSIETLWVNGQNSDGKLNGTLDVLKGMMYLKQIWVHGNSFTGPIPDLSNHDQLFDVSLRDNQLTGVVPPSLTALPALKVVNLTNNLLQGSPPLFKDGVRVDNDLEKGTNSFCTKKAGEPCSPLVDALLSVVEPLGYPLRLAESWKGNDPCAQSWIGIVCSSGNVSIVSFQSLNLSGKISPSFSRLTSLTKLLLANNDLTGTIPSELTSMPLLKELDVSNNKLFGKVPSFRGDVVLKTGGNPDIGKDASQALPGLSPGGKSGSEGKKHNTGAIVGTVVGSFSLLGIAALVFAMYRRKHKRASKVQSPSAIVVHPGHSGDGNALKISVSGTGVGVSSDGGGGGGTGVFSTTSSVQHLEAGNMVISIQVLREVTNNFSEGNILGRGGFGTVYKGELHDGTKIAVKRMESGMMGEKGLTEFESEIAVLTRVRHRHLVALEGHCLDGNERLLVYEYMPQGPLSKHLFEWKEEGLLPLEWKRRLSIALDVARGVEYLHGLAQQIFIHRDIKPSNILLGDDMRAKVSDFGLVRLAPEGKASFETRLAGTFGYLAPEYAVTGRVTTKVDVYSYGVILMEMITGRKAIDNSQPEENVHLVTWFRRMLLNKDSFTKLIDPIMDVDEETLPSFRTVAELAGHCCAREPYQRPDMSHVVNVLAPLVEIWKPSEADDDDIYAIDLDMTLPQALSKWQAIEGKNTFDVSCTSSMLTSGDTTQSSILTRPSGFADSFTSNDGR* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1468 932 Gene3D Phosphorylase Kinase; domain 1 548 655 - -
Gso7g1468 932 MobiDBLite consensus disorder prediction 448 470 - -
Gso7g1468 932 ProSitePatterns Protein kinases ATP-binding region signature. 584 606 IPR017441 GO:0005524
Gso7g1468 932 SUPERFAMILY L domain-like 328 433 - -
Gso7g1468 932 CDD STKc_IRAK 584 857 - -
Gso7g1468 932 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 3 932 - -
Gso7g1468 932 SUPERFAMILY L domain-like 20 298 - -
Gso7g1468 932 Pfam Protein kinase domain 579 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1468 932 SUPERFAMILY Protein kinase-like (PK-like) 556 863 IPR011009 -
Gso7g1468 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Gso7g1468 932 Gene3D Ribonuclease Inhibitor 22 323 IPR032675 -
Gso7g1468 932 SMART serkin_6 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1468 932 Pfam Leucine Rich repeats (2 copies) 390 431 IPR025875 -
Gso7g1468 932 PANTHER OSJNBA0070M12.3 PROTEIN 3 932 - -
Gso7g1468 932 Gene3D Ribonuclease Inhibitor 327 451 IPR032675 -
Gso7g1468 932 ProSiteProfiles Protein kinase domain profile. 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1468 932 Pfam Leucine rich repeat N-terminal domain 329 364 IPR013210 -
Gso7g1468 932 Pfam Leucine rich repeat N-terminal domain 23 58 IPR013210 -
Gso7g1468 932 Gene3D Transferase(Phosphotransferase) domain 1 656 875 - -
Gso7g1468 932 SMART LRR_typ_2 278 300 IPR003591 -
Gso7g1468 932 SMART LRR_typ_2 181 204 IPR003591 -
Gso7g1468 932 SMART LRR_typ_2 106 128 IPR003591 -
Gso7g1468 932 SMART LRR_typ_2 389 413 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1468 Gso-Chr7 32423408 32429217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1468 59 875 Receptor kinase-like Gene Family AT1G55610 28.087 3.19e-76 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Gso7g1468 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1468 - K00924 gmx:100776064 1808.11