LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso7g1467	ATGGCTCTCTGCACATCTTCCTTCTTCTTCACCTTCTTCTTCACCTTCTTCTTGTTCCTCTTCAATCTTCAACCTTCTGTTTCCCAACAACAATTCACATCCTTCAACATCTCACACTCTCCATGGCTCCCAGCACAGAACAAAACCCTTCTCTCTCCAAACAAAAACTTCACTGCAGGCTTCTTTCCCCTGCCAAACTCTTCAAATGTCTTCACTTTCTCCATTTGGTACTCCAAAGTGCCTCCAAGTGCAAACCCTTTTGTTTGGAATGCCACAGTCCAAGTCAACACTTCTGGCTCCCTTGAAATAACCCCAAAAGGTGAACTTCTCCTCAATGGTTCACCCTTTCAAAGTGCTGAAAATGCTACTACTAACTCCACTTCCAATTCAACCCAACTTCTTCTCCAAAACGATGGAAACTTGGTCTTTGGGGAATGGAGCAGCTTCAAGAACCCCACCAGCACCGTTTTACCCAACCAGAACTTCAGCACAGGGTTTGAGCTTCACTCCAACAATGGGAAATTCAGGTTCATCAAGTCACAGAATCTGGTTCTCAGCTCCACCTCAGATCAATACTACAACACCCCAAGTCAATTGCTGAACATGGATGATAATGGGAAAATGAGCATGCAAGGTAACTCTTTCCTCACTTCAGATTATGGTGACCCCAGGTTCAGAAAACTGGTCCTTGATGATGATGGGAATCTCAGGATCTATAGCTTCTACCCTGAACAGAAAAACCAATGGGTTGAGGTTTGGAAAGGGATATGGGAGATGTGCAGAATCAAAGGCAAATGTGGGCCTAATGCAATTTGTGTGCCCAAAGAGGATTTGAGCACTTCCACTTATTGTGTTTGTCCATCTGGGTTCACACCAGCAATCCAAAATGATCCGGAAAAGGGTTGCAGAAGGAAAATCCCTCTTTCCCAAAACACCCAATTTCTGAGGCTTGATTATGTGAACTGCTCAAGTGACGGTCATTTGAATGAAATTAAAGCTGATAACTTTGCAATGTGCGAGGCAAATTGCTCAAGAGAAAAAACCTGTCTTGGGTTTGGATTCAAGTATGATGGATCTGGCTACTGTATGTTGGTGAATGGCACAAATCTTCAATATGGGTTTTGGTCACCAGGCACTGAGGCTGCCTTGTTTGTAAAGGTTGACAAATCCGAGTCATCAGTTTCCAACTTCATTGGCATGACTGAGGTGATGCAAACCACATGTCCTGTGAACATAAGCCTCCCACTTCCACCAAAGGATTCAAACGCCACAGCAAGGAACATTGCCATAATCTGCACCCTTTTTGCTGCAGAACTCATTGCTGGGGTGGCTTTCTTCTGGTCCTTCCTCAAGAGGTACATCAAGTATAGGGACATGGCAACCACATTAGGCCTTGAGCTTCTCCCTGCTGGGGGACCAAAGAGGTTCACCTACTCAGAAATCAAAGCTGCCACCAAAGATTTCTCCAACTTAATAGGCAAAGGGGGCTTTGGAGATGTGTACAAGGGTGAGTTACCTGACCATAGAGTGGTGGCAGTGAAGTGCCTCAAGAATGTCACAGGTGGAGATGCTGAGTTTTGGGCAGAAGTCACAATCATTGCCAGAATGCACCACCTCAACTTGGTGAGGCTGTGGGGATTCTGTGCTGAGAAGGGCCAAAGGATACTTGTCTATGAACACATCCCTGGTGGATCATTGGACAAGTACCTCTTCAGGGTCAATAAGTCTCATAACAATAACCATCTCAAGGAGCAATCAAGTAGTTTGAATCCAAACACACCACAACAAGAAAGGCATGTTTTGGATTGGAGCATGAGGTACAGAATAGCCCTTGGTATGGCAAGGGCCATTGCCTACTTACATGAGGAGTGTTTGGAGTGGGTTTTGCACTGTGACATCAAGCCAGAGAACATTCTACTAGGTGATGACTTTTGTCCCAAGATATCAGATTTTGGGCTTGCCAAGTTGAGGAAAAAAGAGGACATGGTGACCATGTCTAGGAGGAGGGGCACACCAGGGTACATGGCACCAGAATGGATCACTGCAGACCCAATTACCTCAAAGGCTGATGTGTATAGTTTTGGCATGGTGCTTTTGGAGCTTGTGAGTGGGATTAGGAACTTTGAGATCCAAGGTTCTGTGGTTAGGAGTGAGGAGTGGTACTTCCCTGGTTGGGCCTTTGATAAGATGTTTAAGGAGATGAGAGTGGAGGAGATTTTGGATGGGCAAATTAGGGATGCTTATGATAGTAGGGCACACTTTGAGATGGTTAATAGGATGGTGAAGACTGCAATGTGGTGTCTGCAAGATAGGCCTGAGTTGAGGCCCACTATGGGGAAGGTGGCCAAGATGTTGGAAGGGACTGTGGAGATCACTGAGCCCAAAAAGCCCACTGTTTTCTTCCTTGGTGAAGAGTAG	2418	0.4562	MALCTSSFFFTFFFTFFLFLFNLQPSVSQQQFTSFNISHSPWLPAQNKTLLSPNKNFTAGFFPLPNSSNVFTFSIWYSKVPPSANPFVWNATVQVNTSGSLEITPKGELLLNGSPFQSAENATTNSTSNSTQLLLQNDGNLVFGEWSSFKNPTSTVLPNQNFSTGFELHSNNGKFRFIKSQNLVLSSTSDQYYNTPSQLLNMDDNGKMSMQGNSFLTSDYGDPRFRKLVLDDDGNLRIYSFYPEQKNQWVEVWKGIWEMCRIKGKCGPNAICVPKEDLSTSTYCVCPSGFTPAIQNDPEKGCRRKIPLSQNTQFLRLDYVNCSSDGHLNEIKADNFAMCEANCSREKTCLGFGFKYDGSGYCMLVNGTNLQYGFWSPGTEAALFVKVDKSESSVSNFIGMTEVMQTTCPVNISLPLPPKDSNATARNIAIICTLFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSEIKAATKDFSNLIGKGGFGDVYKGELPDHRVVAVKCLKNVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEHIPGGSLDKYLFRVNKSHNNNHLKEQSSSLNPNTPQQERHVLDWSMRYRIALGMARAIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGIRNFEIQGSVVRSEEWYFPGWAFDKMFKEMRVEEILDGQIRDAYDSRAHFEMVNRMVKTAMWCLQDRPELRPTMGKVAKMLEGTVEITEPKKPTVFFLGEE*	806

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso7g1467	805	ProSiteProfiles	Protein kinase domain profile.	486	789	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso7g1467	805	SMART	blect_4	45	152	IPR001480	-
	Gso7g1467	805	Gene3D	Phosphorylase Kinase; domain 1	460	560	-	-
	Gso7g1467	805	CDD	STKc_IRAK	492	787	-	-
	Gso7g1467	805	Gene3D	Transferase(Phosphotransferase) domain 1	563	797	-	-
	Gso7g1467	805	SMART	serkin_6	486	785	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso7g1467	805	ProSiteProfiles	PAN/Apple domain profile.	302	388	IPR003609	-
	Gso7g1467	805	Gene3D	-	37	152	IPR036426	-
	Gso7g1467	805	ProSitePatterns	Protein kinases ATP-binding region signature.	492	514	IPR017441	GO:0005524
	Gso7g1467	805	Pfam	S-locus glycoprotein domain	221	293	IPR000858	GO:0048544
	Gso7g1467	805	PANTHER	OS07G0415500 PROTEIN	9	805	-	-
	Gso7g1467	805	Pfam	Protein kinase domain	490	781	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso7g1467	805	SUPERFAMILY	Protein kinase-like (PK-like)	469	786	IPR011009	-
	Gso7g1467	805	Gene3D	-	153	258	IPR036426	-
	Gso7g1467	805	PANTHER	OS10G0101000 PROTEIN	9	805	-	-
	Gso7g1467	805	SUPERFAMILY	alpha-D-mannose-specific plant lectins	74	167	IPR036426	-
	Gso7g1467	805	PIRSF	SRK	3	805	IPR024171	GO:0004674
	Gso7g1467	805	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	628	640	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso7g1467	Gso-Chr7	32414849	32417524	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso7g1467	401	788	Receptor kinase-like Gene Family	AT4G18250	36.160	8.70e-74	252

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Gso7g1467		Pkinase	2.9e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso7g1467	-		-	gmx:100775518	1625.91