Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1453 ATGGCTCCTGCTGCGGCGGAGTTTCCGGTGGGTCTCCGGGTTCTGGTGGTCGACGACGACGCCACCACGTTGAAGATTATCGAGCAAATGTCTATTCGCTGCCGTTACCGTGTTACCACATGCACTGAGGCTACTGTGGCTTTGAATCTTCTGCGGGAGAGGAAAGGTTGTTTTGATGTGGTGCTGAGTGATGTTCATATGCCAGACATGGATGGCTATAAACTCCTTGAACATGTTGGGCTGGAAATGGACCTTCCTGTAATTATGATGTCTGGTGATAGTACTACAAGTGCTGTCATGAAGGGAATCAGACATGGGGCTTGTGATTATTTGATTAAGCCTGTACGTGAGGAAGAACTAAGGAATATATGGCAGCATGTTGTTAGGAAATTCTGGAATGACAGCAAAGAACAGGATAATTCTGGCAGCATGGAAGATAGTGATCAAAATAAACGGGGGAATGATGATGCTGAATATACTTCTGTTGCTGACGCAGCAGTAGTTAAAGCACCAAAAAAGAGGAGCAGTTTAAAAGAAGAAGATATTGAATTAGAGAGTGATGATCCAGCTGCATCTAAGAAGCCCCGTGTAGTGTGGTCTGTGGAACTGCATCAACAATTTGTCAGTGCAGTGAATCAACTTGGGCTTGACAAGGCTGTGCCAAAGAGAATACTTGAATTGATGAATGTCCCTGGTTTGACAAGAGAAAATGTTGCAAGTCATTTGCAGAAATTTAGACTTTATTTGAAGCGATTAACTGGAGTGGCACAGCAACAGAATGGGATGCTAAACACAGTTCCTGGGCCTATAGAATCCAATCTGGGAACTAATGGAAGATTTGACGTACAAGCTTTGGCTGCTGCTGGCCATGTTCCCCCTGAAACACTTGCAGCCATTCATGCTGAGCTCTTAGGTCACCCGACAAATAACATAATGTCTACAGTGGACCAAACTACCCTACTGCAAGCATCAATACAGGGGCTAAAACATTCCCATGCTGGACATGCTGTGGCATATGGTCAGCCTCTTGTAAAGTGTCCTTCGAACATTGGCAAGAATTTCTCTCCATCTATCTTGACTGTAAATGATACGTCATCAGGATATGGTGCATGGCTGTCATCTAATAATACAATTGGTTTAGTGAGACCCAATAATAGTGTTGAAAGGGTGGGTATTCAGAATAACAACATGCTGATATTAGAGCACCAACAAAGGCAGCAGCCCCAGCAAAAACAACAGCAGCAACAGCAAAAGCAACAGCAACAGCTGCAGCAGCAGTCATTGATACATGATCGAAGTTGTTCAATCAATGTTCAACCATCTTGCCTGGTGGTTCCCTCTCAATCCTCTGAAACTTTCCAGGCAATAAATAGTCCTGCTTCTGTCAATCAGGATTGCAGTTTTGCCTGGAATGCCATTATTGATTATAGTCTATTGCCACAAAAATCAAATAATTCATTTAGTGCATCTCAATTTCCTGGTGGGGACACAAAAGCTCGAGGTGTTCTCTATGGGTATACGACACCCTCTTCTTGTTCAACAAGCTCCAGCAATGGCAATATACAACAGCTTCAAAACTCCACTTTAACATTTGGTGCTGCAAGACCTTTGCCTAGCCTTTTGCCCATGACTGACAGAAAAGATCCCTATGGTTTTAAATCGGGTGATTTACTTGATCAAGTATGCTTTAGGAATCTTGGGTTTGTTGGCAAAGATAGCTGCATTCCAAGTAGGTTTGTAGAAAATGAAATTGAGTCATCTGTAAGTGATTTTACCCAAATGAAAGTTAATGTAGATATCAGTGGCAACAGACAGAAGGAGGAGCCAAATATTCCAAAAGTGAGCCACCCTATCATAGAAAGATATCCATCTCGTGATCATTCAAGTGTGTTCGCTGAATAG 1902 0.429 MAPAAAEFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQHVVRKFWNDSKEQDNSGSMEDSDQNKRGNDDAEYTSVADAAVVKAPKKRSSLKEEDIELESDDPAASKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLTGVAQQQNGMLNTVPGPIESNLGTNGRFDVQALAAAGHVPPETLAAIHAELLGHPTNNIMSTVDQTTLLQASIQGLKHSHAGHAVAYGQPLVKCPSNIGKNFSPSILTVNDTSSGYGAWLSSNNTIGLVRPNNSVERVGIQNNNMLILEHQQRQQPQQKQQQQQQKQQQQLQQQSLIHDRSCSINVQPSCLVVPSQSSETFQAINSPASVNQDCSFAWNAIIDYSLLPQKSNNSFSASQFPGGDTKARGVLYGYTTPSSCSTSSSNGNIQQLQNSTLTFGAARPLPSLLPMTDRKDPYGFKSGDLLDQVCFRNLGFVGKDSCIPSRFVENEIESSVSDFTQMKVNVDISGNRQKEEPNIPKVSHPIIERYPSRDHSSVFAE* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1453 633 MobiDBLite consensus disorder prediction 601 633 - -
Gso7g1453 633 MobiDBLite consensus disorder prediction 135 165 - -
Gso7g1453 633 Gene3D - 12 149 - -
Gso7g1453 633 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 458 IPR045279 GO:0009736
Gso7g1453 633 SUPERFAMILY Homeodomain-like 192 251 IPR009057 -
Gso7g1453 633 MobiDBLite consensus disorder prediction 171 189 - -
Gso7g1453 633 MobiDBLite consensus disorder prediction 135 158 - -
Gso7g1453 633 Pfam Myb-like DNA-binding domain 196 244 IPR001005 -
Gso7g1453 633 PIRSF RR_ARR_type-B 2 597 IPR017053 GO:0003677|GO:0003700|GO:0009736
Gso7g1453 633 ProSiteProfiles Response regulatory domain profile. 13 128 IPR001789 GO:0000160
Gso7g1453 633 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 191 250 IPR017930 -
Gso7g1453 633 Gene3D - 190 253 - -
Gso7g1453 633 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 8 458 - -
Gso7g1453 633 CDD REC_typeB_ARR-like 14 128 - -
Gso7g1453 633 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 194 247 IPR006447 GO:0003677
Gso7g1453 633 Pfam Response regulator receiver domain 14 123 IPR001789 GO:0000160
Gso7g1453 633 MobiDBLite consensus disorder prediction 170 189 - -
Gso7g1453 633 MobiDBLite consensus disorder prediction 609 627 - -
Gso7g1453 633 MobiDBLite consensus disorder prediction 403 424 - -
Gso7g1453 633 SMART REC_2 12 124 IPR001789 GO:0000160
Gso7g1453 633 SUPERFAMILY CheY-like 11 133 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1453 Gso-Chr7 31718499 31724900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1453 4 265 Response Regulator Gene Family AT2G25180 57.414 3.62e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Gso7g1453 Response_reg 1.6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1453 - K14491 gmx:100804937 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1453 7 31718499 31724900 Gso2g0706 2 7392770 7397725 GST